Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02254 ATGGAACCTCGAGTTGGGAATAAGTTCCGTCTTGGCCGAAAGATTGGTAGCGGATCGTTCGGAGAGATCTATCTTGGTACTAATATTCAGACGAATGAAGAGGTCGCGATTAAGCTTGAAAATATCAAGACCAAGCACCCTCAATTGTTGTATGAATcgaagttatataaaatactgCAAGGAGGAACTGGAATACCAAATCTTAGATGGTTTGGCATTGAAGGAGACTACAATGTACTTGTGATGGATTTACTGGGGCCTAGTCTTGaggatttattcaatttctgCAGTCGGAAATTGTCTCTCAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTTGAATATGTTCATTCAAAATCCTTTTTACATCGAGACATAAAGCCAGATAACTTCCTCATGGGTTTAGGCAGGCGTGCAAATCAGGTCTACATCATTGACTTTGGTCTGGCTAAGAAATACAGGGACACCTCCACCCATCAACATATTCCTTACagAGAGAATAAGAATTTGACTGGAACTGCTAGATATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGATGACTTAGAGTCACTTGGATACGTTTTTATGTACTTTTTGAGAGGAAGTCTTCCTTGGCAAGGACTGAAAGCAGGCACTAAGAAGCAGAAGTATGAGAAGATCAGCGAGAAGAAAGTTTCTACATCCATTGAgTCTCTTTGTCGTGGTTATCCATCGGAGTTTGCGTCATACTTCCATTACTGTCGGTCACTTCGATTTGATGATAAACCAGACTATGCTTATCTGAAAAGGCTTTTCCGAGACCTTTTCATCCGTGAAGGATTCCAGTTCGATTATGTCTTTGATTGGACCATTTTGAAATATCAACAATCTCAAATTGCCAATCCTCCTGCCCGTGCTGTCGGTCCTGGTGCTGGGCCAAGTTCTGGCTTGCCTCCAGCTAATGCAAATGCTGATAGACATTCAgGTGGGGAAGAAGGTAGGCATACTGGTTGGTTATCGTCAGATCCTGCTCGCAGGAGAAATTCTGGACCTGTTACAAATGATCTCAAATCTAGACAAAAAGCCCCAGTTGCAAATGACTCAACTGCATTTAAAGATGTTGTGTTGTCAAGCTCTAATATCTTCTGGTCAAGTGGATCCTCTAGGCGAGGTGCTATCTCCAGCAGTCGCGATGCAGCTGTTGTTGGGAGTGAGACTGAGGCTTCTCGCACTTTAGCCACGGATGCAAGTCCAGGAGCTCTGCGTAAAATTTCTGGTGCTCAAAGAAGTTCACCTATGATCACTTCAGAGCAAAACCGAAGTTCATCTGGCAGAAACACATCAAACATAAAGAATTTTGAGTCAACTCTCAGAGGTATTGAGAGCCTGCATTTCAATGACGAGAGGGTACAATATTA 1421 0.4159 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENIKTKHPQLLYESKLYKILQGGTGIPNLRWFGIEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEYVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVFMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIANPPARAVGPGAGPSSGLPPANANADRHSGGEEGRHTGWLSSDPARRRNSGPVTNDLKSRQKAPVANDSTAFKDVVLSSSNIFWSSGSSRRGAISSSRDAAVVGSETEASRTLATDASPGALRKISGAQRSSPMITSEQNRSSSGRNTSNIKNFESTLRGIESLHFNDERVQY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02254 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva02g02254 473 MobiDBLite consensus disorder prediction 343 365 - -
Bva02g02254 473 MobiDBLite consensus disorder prediction 429 454 - -
Bva02g02254 473 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02254 473 MobiDBLite consensus disorder prediction 426 454 - -
Bva02g02254 473 PANTHER CASEIN KINASE-RELATED 1 458 - -
Bva02g02254 473 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Bva02g02254 473 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Bva02g02254 473 MobiDBLite consensus disorder prediction 328 342 - -
Bva02g02254 473 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02254 473 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02254 473 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva02g02254 473 MobiDBLite consensus disorder prediction 304 365 - -
Bva02g02254 473 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 458 IPR030509 GO:0004672|GO:0005524
Bva02g02254 473 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02254 Bva-Chr2 22473233 22476956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02254 7 223 EF-hand Containing Proteins AT2G17890 26.222 5.05e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva02g02254 Pkinase 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02254 K02218 - gmx:100778165 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02254 02 22473233 22476956 Bva02g02254 02 22473233 22476956 ECH