Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02246 atgGGGCATCATTCTTGCTGCAATAAGCAGAAGGTCAAAAGAGGGTTATGGTCACCAGAGGAAGATGAAAAACTCATTAACTACATCACAACTTATGGACATGGTTGCTGGAGCTCTGTCCCAAAACTTGCagGCCTCCAAAGGTGTGGGAAGAGCTGCCGACTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGCTTCTCTCCTCAAGAAGCTGCTCTCATTATCGAACTCCATAGCATTTTAGGCAACAGGTGGGCTCAGATAGCAAAGCACCTACCTGGAAGAACAGATAATGAAGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAACTCCTCTCACATGATGTTGTTCCTGCTTTGGCCACATTTTCTGATATTCACAGACCCGGTAATGGTTCTGTGGGAAGCTTCTTCAATTTAACTGCAAACCCTAATGTGATCCTAAGCACTCACCATCAACCAGCAGACCAGCTCTACTTTCCCACCCCATCACCAATCCTACATGGTTTTGATCACAATGAACTTAAGCTAGACACCAACATTTGTAGTGGCAATTTCCTGCATATTCAGCATCTCTTACCAGAGACACCACCCAACCCATCTTCTTTTGAAGAAACATGGCCCTTGGGTTGTGTACCTCTTCGTCTAAATCCAAACCAAGTAAATCAAATCACTGGAAGTGACAGCACCccacaaaatattattgagaAATTCATCAACACAAGTTCAGTGCAGCACTTTGACAGTCATCTGGCCGATCACATTTTGCCAAAAATCTGCGAGAGCACTGAGGATTATGTCTGCAGTATCCCATATTCTTCATCTGTTTCACAAGAACTTGACCCTCTTCCAAGAATTCAGTGTGACCCATCTGGCATTTGTCCCCAAGATCAAGCCGTTTCAGCCAATCAAATGGAATTCATTGATGTCATCATGTCATCATTACCATCATTGCCATCATCAACAACATCATCATCAGTATCATCATCATTGTCGCCATTATCAAGCAGCTGCCAAATTGTTACAAACCCTATTAATCTTCCTTCAATCTGGGAGCCTTG 1076 0.4191 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVVPALATFSDIHRPGNGSVGSFFNLTANPNVILSTHHQPADQLYFPTPSPILHGFDHNELKLDTNICSGNFLHIQHLLPETPPNPSSFEETWPLGCVPLRLNPNQVNQITGSDSTPQNIIEKFINTSSVQHFDSHLADHILPKICESTEDYVCSIPYSSSVSQELDPLPRIQCDPSGICPQDQAVSANQMEFIDVIMSSLPSLPSSTTSSSVSSSLSPLSSSCQIVTNPINLPSIWEP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02246 358 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva02g02246 358 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva02g02246 358 Gene3D - 69 116 - -
Bva02g02246 358 CDD SANT 17 61 IPR001005 -
Bva02g02246 358 SMART sant 66 114 IPR001005 -
Bva02g02246 358 SMART sant 13 63 IPR001005 -
Bva02g02246 358 Gene3D - 11 67 - -
Bva02g02246 358 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva02g02246 358 PANTHER TRANSCRIPTION FACTOR MYB26 2 352 - -
Bva02g02246 358 PANTHER MYB DOMAIN PROTEIN 55 2 352 - -
Bva02g02246 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva02g02246 358 CDD SANT 69 109 IPR001005 -
Bva02g02246 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva02g02246 358 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva02g02246 358 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02246 Bva-Chr2 22430531 22432327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02246 1 119 MYB Transcription Factor Family AT3G13890 96.639 2.88e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g02246 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02246 K09422 - gmx:100785147 444.891