Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02231 ATGGGTCGAAGTCCATGTTGTTCTAAAGAAGGTTTGAATAGAGGAGCATGGACAGCCACAGAAGACAAAATTCTCACAGAATACATTAAGATTCATGGCGAAGGAAAATGGAGACACCTACCTAAAAAAGCAGGTCTTAAGAGATGTGGGAAGAGTTGCAGACTAAGATGGCTAAATTATCTGAGACCTGATATTAAAAGAGGTAATATAACCGATGACGAACAGGAACTCATTATCAGGCTTCACAACCTTCTTGGAAACAGGTGGTCTTTGATAGCTGGACGGCTCCCGGGCCGAACAGACAATGAAATCAAGAACTACTGGAACACCAatattggaaagaaaattcagaatGGCAACCCAATCTCTTCCACTTTACCTAATTCATCTCAACACAAAACAAACCTGAAAACCCAAAAGCAGAATCCGAACCCGCCCAATATGGGTTCATGCGTGTTCCGGACCAAGGCAACAAGGTGCACCAAGGTAATACTAACCCAAGAACCACAACGACTTGGGGCGCCATTAATGGCTGAACCCTTCAAGGCCATGACCCATGACAATAGCCACGATTACAAGATGGAGGATGGAGCAGGAGCCAGGTCGGATATGTCACCCTCAACCCCACCATTTGAAACAGAAGGGCAAAACCCGTTGGATTTCATGGTGGATTTTGAGATGGATCAGACTTTCTTTTCTGATCTTTTTAAGATGGATTTTCCAGAACCATCTCgttttgaaaataacataCAAGACAATAATAACGTTAGCGTCAGTGACAAAAGCCAAGCATCTCCAAAGTCTAACGACGTCGTTGACACTCCCACTCCCTTGCTTTCGGAAGATTCCTTGCATGGCACTGGAGGCTTTCAATCAATGGCAACTTTAGGGGACCATGAATTTGATTGGCTTTG 914 0.4289 MGRSPCCSKEGLNRGAWTATEDKILTEYIKIHGEGKWRHLPKKAGLKRCGKSCRLRWLNYLRPDIKRGNITDDEQELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKIQNGNPISSTLPNSSQHKTNLKTQKQNPNPPNMGSCVFRTKATRCTKVILTQEPQRLGAPLMAEPFKAMTHDNSHDYKMEDGAGARSDMSPSTPPFETEGQNPLDFMVDFEMDQTFFSDLFKMDFPEPSRFENNIQDNNNVSVSDKSQASPKSNDVVDTPTPLLSEDSLHGTGGFQSMATLGDHEFDWL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02231 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva02g02231 304 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bva02g02231 304 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 258 - -
Bva02g02231 304 CDD SANT 16 61 IPR001005 -
Bva02g02231 304 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva02g02231 304 Gene3D - 70 144 - -
Bva02g02231 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva02g02231 304 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 258 - -
Bva02g02231 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva02g02231 304 SMART sant 66 114 IPR001005 -
Bva02g02231 304 SMART sant 13 63 IPR001005 -
Bva02g02231 304 CDD SANT 71 112 IPR001005 -
Bva02g02231 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva02g02231 304 MobiDBLite consensus disorder prediction 246 276 - -
Bva02g02231 304 MobiDBLite consensus disorder prediction 243 288 - -
Bva02g02231 304 MobiDBLite consensus disorder prediction 121 149 - -
Bva02g02231 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva02g02231 304 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02231 Bva-Chr2 22364613 22366332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02231 1 116 MYB Transcription Factor Family AT4G09460 74.138 5.82e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g02231 Myb_DNA-binding 7.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02231 K09422 - qsu:112003598 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02092 08 13857694 13858718 Bva02g02231 02 22364613 22366332 ECH
Bva06g00545 06 5835584 5837003 Bva02g02231 02 22364613 22366332 ECH
Bva05g01100 05 5661552 5662740 Bva02g02231 02 22364613 22366332 ECH
Bva02g02231 02 22364613 22366332 Bva02g02231 02 22364613 22366332 ECH