Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02228 ATGGCTTCTGTGAGTGACGAGAGTACTATTAAAGGACATGGGAAGCCAATTGAAACCATGAAAAAGGTTCCTCTTAGCAAGGGAGCTTGGACACCAGAAGAAGATAGGAAACTGGCTGAGGTTATTGCAGTTCATGGAGCCAAACGGTGGAAATCCATTGCAGCTAAAGCagGTCTTAATAGGTGTGGTAAGAGTTGCAGGCTAAGGTGGTTGAATTATCTGAGACCCAACATCAAGAGGGGCAACATATCTGACCAAGAAGAGGATTTGATACTTAGGCTTCATAAGCTCCTCGGAAACAGGTGGTCTTTGATTGCCGGAAGGTTACCAGGTCGAACAGATAATGAGATAAAGAATTACTGGAATTCTCATTTgagcaagaaaataaagcagagagagaaacaaagtGAGAGCTCAACAAGAGAAGGGAGCACGCCACCGAAGAAAAGGGTGGCAGAGGAGACTCCTGCTGAGCTAATTAGAGAAGAGAATTCAactgaagaaattgaagatgaCTCAGAGTTAAACTTTGACGTTAATGACTTCTTTGATTTCTCTGAGGAAAGTCCACTGAATATGGAGTGGGTTAGCAGATTCCTTCAAGTTGATCAAGGTATAAGCGGAATCTCTCACTG 635 0.4 MASVSDESTIKGHGKPIETMKKVPLSKGAWTPEEDRKLAEVIAVHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQREKQSESSTREGSTPPKKRVAEETPAELIREENSTEEIEDDSELNFDVNDFFDFSEESPLNMEWVSRFLQVDQGISGISH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02228 211 Gene3D - 27 79 - -
Bva02g02228 211 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Bva02g02228 211 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Bva02g02228 211 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Bva02g02228 211 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Bva02g02228 211 CDD SANT 84 125 IPR001005 -
Bva02g02228 211 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 21 208 - -
Bva02g02228 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 129 IPR017930 -
Bva02g02228 211 PANTHER TRANSCRIPTION FACTOR WER-LIKE ISOFORM X1 21 208 - -
Bva02g02228 211 SMART sant 79 127 IPR001005 -
Bva02g02228 211 SMART sant 26 76 IPR001005 -
Bva02g02228 211 Gene3D - 83 155 - -
Bva02g02228 211 MobiDBLite consensus disorder prediction 128 163 - -
Bva02g02228 211 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Bva02g02228 211 CDD SANT 29 74 IPR001005 -
Bva02g02228 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
Bva02g02228 211 MobiDBLite consensus disorder prediction 128 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02228 Bva-Chr2 22355291 22356510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02228 27 179 MYB Transcription Factor Family AT5G40330 53.797 1.84e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g02228 Myb_DNA-binding 7.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02228 K09422 - qsu:112020715 291.967