Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02226 ATGATGAGTGCAACTGCAAGAAATAGACCTCCTTTCACAGCAACTCAGTGGCAAGAACTGGAGCAACAAGCTCTTATTTACAAGTACATGGTATCAGGGGTGCCAATCCCACCTGATCTCATTTACTCTATCAAAAGAAGTCTAGAAACTTCAATGTCTTCAAGACTCTTCCCCCACCACCCCACTGTTGGATGGGGATGTTTTGAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGACGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCCAAATACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAACAAgcacaaacacaaacacaaacacaaacacCTCACATACAGTCTCATCATCATATAACAGAAACCTTTCCATGAGCAACCCAAATACACCTTCAAGTAcctctttccctttttctccATCACCATCATCTATGACATCTGAATCCCAGCCCTATTCTCATCCTTACCAAAATTCTTCTATCAATCCCTTCTTTTACATGCATTCATCATCCTCTTCTAGACCTCCTGATTCTGATTTCCCTCCTCAAAATAGCTCTACCCACCAGCTATTTTTGGACTCCGGATCTTATTCTCAGGATGAAAAGGATTATAGGCATATTCATGGAATGAGGGAGGGCGTGGATGAGCGTGCTTTCTTCCCAGAAGCTTCAGGAACTGCAAGGAACTTCCCTGATTCATTTCAACAATTACCAATGAGTTCCTATAAATCCTATTCAAGTTCTCAGTTCCAAAACGTCAGTGACAATCCAAGACAACAAGAGCCACATTGCTTTGTTTTGGGTACGGACTTCAAATCACCAAGAACAAGTAAAAGTGAGAAAGAAGCTGAGACAAGCCAGAGACCACTTCACCACTTCTTTGGGGAGTGGCCACCAAAGAACTCAGATTCCTGGCTTGATCTTGCTTCCAACTCCAGAATCCCCTCAGGTGATGATGACGATCTTAGTTTAGCTTCTTATTCATTATTCCAAGAGAGGCTTGCTGGTAAAGATTA 1085 0.4111 MMSATARNRPPFTATQWQELEQQALIYKYMVSGVPIPPDLIYSIKRSLETSMSSRLFPHHPTVGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTSTNTNTNTNTSHTVSSSYNRNLSMSNPNTPSSTSFPFSPSPSSMTSESQPYSHPYQNSSINPFFYMHSSSSSRPPDSDFPPQNSSTHQLFLDSGSYSQDEKDYRHIHGMREGVDERAFFPEASGTARNFPDSFQQLPMSSYKSYSSSQFQNVSDNPRQQEPHCFVLGTDFKSPRTSKSEKEAETSQRPLHHFFGEWPPKNSDSWLDLASNSRIPSGDDDDLSLASYSLFQERLAGKD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02226 361 MobiDBLite consensus disorder prediction 104 211 - -
Bva02g02226 361 Pfam WRC 78 120 IPR014977 -
Bva02g02226 361 MobiDBLite consensus disorder prediction 297 312 - -
Bva02g02226 361 PANTHER - 1 339 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva02g02226 361 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 339 - -
Bva02g02226 361 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva02g02226 361 MobiDBLite consensus disorder prediction 291 321 - -
Bva02g02226 361 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva02g02226 361 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva02g02226 361 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Bva02g02226 361 MobiDBLite consensus disorder prediction 118 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02226 Bva-Chr2 22345465 22346847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02226 3 319 GRF Transcription Factor Family AT3G13960 43.514 5.38e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva02g02226 WRC 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02226 - - gmx:100806024 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02226 02 22345465 22346847 Bva02g02226 02 22345465 22346847 ECH