Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02223 ATGACcatggaaccaaacccaacttCAGGTCACATTTTGAACTGGCTTGAAGATTCTCTTTCATTCTTCCCATCATTCTTGGATGATCCATACAACTCTGGTGATATTGAACATTACCAGCTATGGGATCAAGGCCAAGACATAGGCCATTATCAAATTATTGGTTCCCCAGATGTTGCTGCCATTGCCACCAACATTGCTGctgttaataataatagcacACCACCCACTGATCAGCCTTCTAGTTCCATAAATTTACCCTCTTGTGAATTGCCCAGGAAGCGAAAGAACTGCCAAGATTCAAGTCTCAAACCACTTTCAAATCAAAAGCACAAGAAAAGTCAGACCAGGTCAGTGATTGAAGCTGAGAATGGGGATGCAGTTGTTGAAGGGACAACGGTTAAAAAATATGGAGGAAACAAGATAGGTGGTGCTAAAGGCAATGGAAACAACTGTAATAACGGTAATAACAAGGAAGGGAGGTGGGCAGAGCAGTTGCTCAACCCTTGTGCTGCTGCCATAACTGCAGGGCAGCTGAACCTTGTGCAGCACCTCTTATATGTTCTCCATGAGCTCGCCTCTGCCACCGGCGACGCCAATCACCGTCTTGCAACTCACGGTCTCGGAGCATTGGCGCAACATTTATCATCTTCCACCACttgctcttcttcttctgcctCTGTAGGAAATATTACTTTTGCTTCTACAGAACCCCGGTTCTTCCATCGATCTCTGCTCAAGTTCTATGAGGTTAGCCCCTGGTTTTCCTTTCCCAATAACATAGCAAATGCCTGTATCCTCCAAATTCTGGCTGAAGGCGATAATAGTTCACGCACTCTTCATATTGTTGACATTGGGGTCTCTCATGGTGTGCAATGGCCAACACTCCTAGAGGCCTTGACTCGCCGGCCCGGAGGACCTCCTCCGCTGGTTCGCCACACGGTGGTGACCGCCTCCACTGAGGAGTCCCCATTTTCAGTTGGTCCACCAGGTGACAATTTCTCTTCTAGGCTCCTTGGTTTTGCCAAGTCCATCCATGTCAATTTGCAGATAAAAAGGCTTGATAATCAACCTTTAATGAAGCTCAATACCCAAGTTATAGATTCCTCCCCCAATGAAACCTTGATTATATGTGCACAATTTAGGCTCCACCACCTGAATCATAATAGTCCTGATGAGAGAAGTCAGTTTCTGAGAATGTTGAGGAGCATGGAGCCTAAAGGGTTTATATTAAGCGAGAACAATACGGAATGTAGCTGCAACCGTTGTGGGAATTTCAGTACTGGATTTTCTCGGAAAGTAGAGTACTTATGGAAGTTTTTGGATTCCACGAGCTCGGCATTCAAAGGCCGGGAGAGCGAGGAAAGGAGACTGATGGAAGGGGAGGCAGCAAAAGCTTTGACAAACCATGGTGAGATGAATGAAGTGAGAGAGAAATGGTGTGAAAGGATGAAGGAAGCAGGGTTTATGGTGGAGATACTCGGAGAGGATACCATTGATGGAGGTAGAGCTTTCTTGAGGAAGTATGACAACAATTGGGAGATGAAAGTGGAAGAGAACAATACCAATGTGGGACTATGGTGGAAGGGGCAGCCTGTTTCATTCTGTTCCTTGTGGAAATTGGATGGTAAAGACAAGAGTTG 1643 0.4431 MTMEPNPTSGHILNWLEDSLSFFPSFLDDPYNSGDIEHYQLWDQGQDIGHYQIIGSPDVAAIATNIAAVNNNSTPPTDQPSSSINLPSCELPRKRKNCQDSSLKPLSNQKHKKSQTRSVIEAENGDAVVEGTTVKKYGGNKIGGAKGNGNNCNNGNNKEGRWAEQLLNPCAAAITAGQLNLVQHLLYVLHELASATGDANHRLATHGLGALAQHLSSSTTCSSSSASVGNITFASTEPRFFHRSLLKFYEVSPWFSFPNNIANACILQILAEGDNSSRTLHIVDIGVSHGVQWPTLLEALTRRPGGPPPLVRHTVVTASTEESPFSVGPPGDNFSSRLLGFAKSIHVNLQIKRLDNQPLMKLNTQVIDSSPNETLIICAQFRLHHLNHNSPDERSQFLRMLRSMEPKGFILSENNTECSCNRCGNFSTGFSRKVEYLWKFLDSTSSAFKGRESEERRLMEGEAAKALTNHGEMNEVREKWCERMKEAGFMVEILGEDTIDGGRAFLRKYDNNWEMKVEENNTNVGLWWKGQPVSFCSLWKLDGKDKS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02223 547 Pfam GRAS domain family 164 540 IPR005202 -
Bva02g02223 547 MobiDBLite consensus disorder prediction 71 124 - -
Bva02g02223 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 540 IPR005202 -
Bva02g02223 547 MobiDBLite consensus disorder prediction 71 88 - -
Bva02g02223 547 ProSiteProfiles GRAS family profile. 154 540 IPR005202 -
Bva02g02223 547 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 540 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02223 Bva-Chr2 22337484 22339127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02223 2 540 GRAS Transcription Factor Family AT3G13840 51.366 1.76e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g02223 GRAS 5.5e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02223 - - gmx:100810818 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02223 02 22337484 22339127 Bva09g02159 09 17853839 17855547 BWGD
Bva02g02223 02 22337484 22339127 Bva02g02223 02 22337484 22339127 ECH