Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02216 ATGCCTTCCAAGAGACTTCTATTCAGGGCCTTCATTCTTGGCTGTTTCAAGGCCAACTGGAAGCAGCACACCCATCATCCAACCATAGTTCCCAGAAAAACAAGTTCGAGCAGGATATCCCTCTCTGATTTGAGCAATTCTTCATCACTCTCTATCATGAGTGATTTATCCAATTCtcttcttggatcaaatcttcaTATTTTCACTTACAAGGAGCTCAAAGATATCACAAGCAACTTCAGCAAAAGCAGTATTCTTGGAGAAGGTGGATTTGGACGAGTTTATAAAGGATTCATTGATGACAAGCTTAGGCCCGGATTGGAAGCTCAGGTTGTAGCAGTTAAGAAGTTGGATTTGGATGGCAAACAAGGCCATAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAGTTGAAGCACCCTCATTTGGTGAACTTGATTGGCTATTGCTGTGAAGATGAGCATAGGCTTCTTGTCTATGAATACATGGAACGGGGCAATCTTGAAGAAAAGCTTTTCAAAGGTTATTTGGCAGCCTTGCCTTGGCTAAAGAGGCTTAAAATAGCCATTGGAGCTGCAAACGGGCTTGCTTTTCTTCatgaagaagagaaaccaGTCATATATAGAGATATTAAAGCCTCAAACATTCTATTAGATGCTGATTACAATTCCAAACTCTCCGATTTCGGGCTAGCAACTGATGGTCCAGAAGGAGATGAAATACATATCACAACTAGCGTAATGGGTACCCATGGCTATGCTGCTCCCGAGTATATCATGTCAGgCCATTTGACAATCACGAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAGCTACTTACTGGAAGGAGGTCCGTGGACAAGAAAAGACCCACTAGAGAACAAGATTTGGTGGAGTGGGCAAGGCCTTTATTGAAGGATTCTCATAAACTTGAAAGAATAATGGATCCAAGACTTGAGGGTCAGTACTCCACAGAAGGGGCTAGAAAGGTTGCAGCTTTAGCATATCAATGCCTTAGCCATCAGGCAAAGTCCAGACCCACAATGCGTACTGTGGTTAAGACCTTGGAGCCTCTCATGGACTTAACAGATTTCCCAGTTGgccattttgtttatattgttCCCACTGAGGCAGAGAATGAAACTTCAACTAAAAGCAATTTCAAAGTAGTAGAGAATGACCATCATAAACAAAgcaggagagaaaaaaaaagcgaacaagaagaagaaaattgtgagaagaaaaacaagggcCGCAAATGGCTTCGAAGAAGTCATAGGTATAGACGTCAGATTAAGCTACTGAGGAATCGTGCAGTTTACTCTGATACTGCTCTGTATAAAACTCTTGGTACAAGTCTATACTCTCCCAAACAAGGATCAGAAAAAGGGGTAGGTATTAGCATGACATA 1415 0.3901 MPSKRLLFRAFILGCFKANWKQHTHHPTIVPRKTSSSRISLSDLSNSSSLSIMSDLSNSLLGSNLHIFTYKELKDITSNFSKSSILGEGGFGRVYKGFIDDKLRPGLEAQVVAVKKLDLDGKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKGYLAALPWLKRLKIAIGAANGLAFLHEEEKPVIYRDIKASNILLDADYNSKLSDFGLATDGPEGDEIHITTSVMGTHGYAAPEYIMSGHLTITSDVYSFGVVLLELLTGRRSVDKKRPTREQDLVEWARPLLKDSHKLERIMDPRLEGQYSTEGARKVAALAYQCLSHQAKSRPTMRTVVKTLEPLMDLTDFPVGHFVYIVPTEAENETSTKSNFKVVENDHHKQSRREKKSEQEEENCEKKNKGRKWLRRSHRYRRQIKLLRNRAVYSDTALYKTLGTSLYSPKQGSEKGVGISMT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02216 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bva02g02216 471 SMART serkin_6 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02216 471 CDD STKc_IRAK 86 360 - -
Bva02g02216 471 ProSitePatterns Protein kinases ATP-binding region signature. 86 116 IPR017441 GO:0005524
Bva02g02216 471 Gene3D Transferase(Phosphotransferase) domain 1 163 366 - -
Bva02g02216 471 Gene3D Phosphorylase Kinase; domain 1 40 162 - -
Bva02g02216 471 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02216 471 MobiDBLite consensus disorder prediction 389 418 - -
Bva02g02216 471 MobiDBLite consensus disorder prediction 384 422 - -
Bva02g02216 471 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Bva02g02216 471 PANTHER OS01G0588500 PROTEIN-RELATED 28 418 - -
Bva02g02216 471 PANTHER BNAA02G16030D PROTEIN 28 418 - -
Bva02g02216 471 Pfam Protein tyrosine and serine/threonine kinase 83 357 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02216 Bva-Chr2 22307079 22309424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02216 66 393 Glycoside Hydrolase AT3G07070 48.036 1.38e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva02g02216 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02216 - - gmx:100790454 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02077 08 13786419 13788436 Bva02g02216 02 22307079 22309424 ECH
Bva06g00519 06 5715699 5717929 Bva02g02216 02 22307079 22309424 ECH
Bva02g02216 02 22307079 22309424 Bva02g02216 02 22307079 22309424 ECH
Bva02g02216 02 22307079 22309424 Bva10g00494 10 4825033 4827380 ECH
Bva02g02216 02 22307079 22309424 Bva06g02289 06 14862191 14866187 ECH