Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02188 ATGGACGATGATGACGAGATCCAGTCGCATCCATCTCCGGCGAGTGAATCTCCTGCTTCTCCCCGATCGAATGGTCGGATTACGGTGACGGTTGCGGCGCCGGCGCCGGTGATGCAGCCGCCTCAGAATAGTTTGGCAGTAGCGCTTCCAATTCAGCAGCCAAGGAGTAATGGTGGAGGTGGCGGAAGGGAGGATTGCTGGAGTGAAGGTGCGACGGCGGTGCTGATCGACGCGTGGGGGGAGAGGTATCTGGAGCTCAGTAGAGGGAATCTGAAGCAGAGGCACTGGAAGGAGGTGGCGGATATTGTGAGCAGCAGGGAGGACTATACGAAAGTTCCCAAAACTGATATTCAGTGTAAGAATCGCATCGATACGGTGAAGAAGAAGTACAAATTGGAGAAGGCGAAGATTGCAGCCGGTAGTGGGCCCAGTAAATGGCCATTCTTTGAGAGATTGGACCAGTTGATCGGTCCAACAGCGAAAATTGTTGGCTCTACTGGTGCCGGAACGAGTGCGGCCAGTAATTTGCAAATCCAGAAAGTGCCTTTGGGAATTCCGGTGGGGATTCGGTCGGTGAATCAGTACCAAATTCATCAACAACCGAAGCAGCAGCCACAGTTGAAGAGTCAGAAGATACAGTACCGGAAACGGGCTCCGGTTGATTCTGATTCATCCCAATCTGAGAGGGAACCTTCGCCAGTTTCGAGCGACAGTTTTCCACCTGAACCGTATGAAAGGAAGAGGCCAAGGGTGCAGGGGGGGATGAATTCGAATGCTGAACGTGCAGGAGCTACGAAAAGCAAGGAAAGAGGGAAAGAGAAGGGGTGGGGGAACGCAGTGAGGGAATTGACACAGGCCATATTGAAATTTGGTGAAGCTTATGAGCAAGCGGAAAGCTCAAAGCTTCAGCAAGTGGTGGAGATGGAGAAGCAGCGAATGAAGTTTGCTAAGGACCTGGAATTGCAAAGAATGCAGTTTTTCATGAAGACCCAGTTGGAGATTTCGCAGCTCAAGCATGGGAGAAGAGGTGGGAACGCCAGTAATCATCACCATagcaacaacaataataataatagtgaCAGTGATAACTA 1091 0.5041 MDDDDEIQSHPSPASESPASPRSNGRITVTVAAPAPVMQPPQNSLAVALPIQQPRSNGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQRHWKEVADIVSSREDYTKVPKTDIQCKNRIDTVKKKYKLEKAKIAAGSGPSKWPFFERLDQLIGPTAKIVGSTGAGTSAASNLQIQKVPLGIPVGIRSVNQYQIHQQPKQQPQLKSQKIQYRKRAPVDSDSSQSEREPSPVSSDSFPPEPYERKRPRVQGGMNSNAERAGATKSKERGKEKGWGNAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKHGRRGGNASNHHHSNNNNNNSDSDN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02188 363 MobiDBLite consensus disorder prediction 197 277 - -
Bva02g02188 363 MobiDBLite consensus disorder prediction 347 363 - -
Bva02g02188 363 Gene3D - 67 132 - -
Bva02g02188 363 MobiDBLite consensus disorder prediction 336 363 - -
Bva02g02188 363 Pfam Myb/SANT-like DNA-binding domain 64 155 IPR044822 -
Bva02g02188 363 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 338 IPR044823 -
Bva02g02188 363 MobiDBLite consensus disorder prediction 11 27 - -
Bva02g02188 363 MobiDBLite consensus disorder prediction 1 28 - -
Bva02g02188 363 MobiDBLite consensus disorder prediction 197 211 - -
Bva02g02188 363 MobiDBLite consensus disorder prediction 263 277 - -
Bva02g02188 363 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02188 Bva-Chr2 22138852 22140478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02188 1 352 Trihelix Transcription Factor Family AT3G14180 49.095 2.81e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva02g02188 Myb_DNA-bind_4 9e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02188 - - gmx:100812599 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02188 02 22138852 22140478 Bva02g02188 02 22138852 22140478 ECH