Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva02g02182 | ATGGCCAAAGTGGGAAAGCTAACGAAGCTCAAGTCAGCGATTAAAAGGTGGCCCTCATTGACCAAGCTCAGCCGCAATAACAGCTGTGTCTCCGCCACCGAAAGCGACTCCGCCAAAGCCTCGGACAAGGACCTCCACGCCGTCTACGTAGGAAAGTCTCGACGCCGGTACCTCGTGAACTCCGACATCGTCGACCACCCCGTGTTCCAAGAACTAGTTGACAGGTCATCGTGTTCTTCTTTCGATGACGGGGTTGTGGTCGCTTGTGAGGTGGTGCTGTTCGAGCACTTGCTGTGGATGCTTGAGAGCGCTGAGACTCAGCTGGGCTCCATGGATGAACTGGTTGAGTTCTACACTTGTGCATGCTG | 368 | 0.5489 | MAKVGKLTKLKSAIKRWPSLTKLSRNNSCVSATESDSAKASDKDLHAVYVGKSRRRYLVNSDIVDHPVFQELVDRSSCSSFDDGVVVACEVVLFEHLLWMLESAETQLGSMDELVEFYTCAC | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva02g02182 | 122 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 4 | 120 | IPR003676 | GO:0009733 | |
| Bva02g02182 | 122 | PANTHER | AUXIN-RESPONSIVE PROTEIN SAUR78 | 4 | 120 | - | - | |
| Bva02g02182 | 122 | Pfam | Auxin responsive protein | 15 | 101 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva02g02182 | Bva-Chr2 | 22115646 | 22116309 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva02g02182 | 3 | 106 | Calmodulin-binding Proteins | AT4G34750 | 25.926 | 6.80e-07 | 43.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva02g02182 | - | - | gmx:100797158 | 180.644 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva02g02182 | 02 | 22115646 | 22116309 | Bva02g02182 | 02 | 22115646 | 22116309 | ECH |