Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02167 ATGTGTGGAGGTGCTATTATTTCAGACTTCATTCCGGCGACGCCGGTGAGGTCTCGCCGTCTCACCGCCGATTACCTCTGGCCGGATTTGAAGAAGAACAGCTCGGGGAGGCGCTTCTCGAAGCCTCTGAGGCCTGAGATTGTCGATTTGGATGATGATTTTGAAGCTGATTTCAGGGAATTTAAGGACGATTCTGATATTGATGTAGATGATGATGAGGATTTGATGGACGATGTCAAGCCCTTCGCTTCCTCAGCTACCAAGCCTTCCAAGGCTGCTCTTTCTCATGGATCTACAAGTGTTAAGTCAATCGAACTCAGTGGGCAAGCTGCAGAATCtgcaaagagaaagaggaagaatcAATATAGGGGAATCCGGCAGCGTCCATGGGGTAAATGGGCAGCTGAGATCCGTGACCCAAGAAAGGGGGTTCGTGTCTGGCTTGGAACCTTCAACACAGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCTCGGAGGATTCGGGGGAAGAAAGCCAAGGTGAATTTCCCTGATGATGCTCCAGCTGCTTCCCCAAAACGTTTCAAGGCAAATCCTGAGAAACAGAACTGTGTTCAGCCCATGTTCGAGCGGAAATTCAATGCTGCCAACAACTTTGAGGACTATTACAGTCTGGTCGAAGAGAAACCAATGGTTAATCAGTATGCTAACATGGGCTCCTTCCCTGCCAATGGAGATGGACTCACATCCCTTGCGCCATCCGAAGATGTTACCTTCTATTTAGGTTCTGATCAGGCGAGTAACTCGTTTGATCATTCTGACCTTGCATGGGCTGAACAGGGCTCCAAGACTCCTGAAATCTCATCCATACTTTCTGCTCCCATGGAGGACGAATCTCAGTTTGTGCAGTATGCAAGCCCCAATAGCCTGCAATCTAACTCTCCACAAGATAACTCTGGAAAGACACTATCTGAGGAGCTTGCTGACATTGAATCCCAGTTGAAGTACTTTCAGGCACCTTATTTTGAAGGGAGCTGGGATGATGCTTCATTGGAGACCCTGCTCACCGGAGATGCTACCCAGGATGGTGGAAACCCAATGAATCTTTGGAGCTTTGATGACCTGCCTTCCATGGTTGGAGGAGTTTTCTA 1133 0.4766 MCGGAIISDFIPATPVRSRRLTADYLWPDLKKNSSGRRFSKPLRPEIVDLDDDFEADFREFKDDSDIDVDDDEDLMDDVKPFASSATKPSKAALSHGSTSVKSIELSGQAAESAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDDAPAASPKRFKANPEKQNCVQPMFERKFNAANNFEDYYSLVEEKPMVNQYANMGSFPANGDGLTSLAPSEDVTFYLGSDQASNSFDHSDLAWAEQGSKTPEISSILSAPMEDESQFVQYASPNSLQSNSPQDNSGKTLSEELADIESQLKYFQAPYFEGSWDDASLETLLTGDATQDGGNPMNLWSFDDLPSMVGGVF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02167 377 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Bva02g02167 377 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Bva02g02167 377 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Bva02g02167 377 Gene3D AP2/ERF domain 120 179 IPR036955 GO:0003700|GO:0006355
Bva02g02167 377 PANTHER EREBP TRANSCRIPTION FACTOR 1 371 - -
Bva02g02167 377 PANTHER DNA-BINDING DOMAIN 1 371 IPR044808 GO:0003700|GO:0009873
Bva02g02167 377 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Bva02g02167 377 CDD AP2 121 180 IPR001471 GO:0003700|GO:0006355
Bva02g02167 377 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Bva02g02167 377 SUPERFAMILY DNA-binding domain 121 179 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02167 Bva-Chr2 22052777 22055521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02167 1 377 AP2-EREBP Transcription Factor Family AT1G53910 47.595 9.25e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g02167 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02167 K09286 - tcc:18596297 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02167 02 22052777 22055521 Bva02g02167 02 22052777 22055521 ECH