Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02165 ATGAAAACACGAAGCGTGTCGAAGCACAAACAAGGGATATTCAATGACGCTTGTGAACTGTCAGTTCTATGCAAAGCACAAACAGCTGTCATTGCCTTCTCACCAAACTTCGACAAGGACGGGGTCCAGACTTTTGGGAACCCTAACCCAGATTCAGTAATCAATCGTTATATCCATGCTGGTGACGACGATCGTGCATGGGAAGAAATTGCTAAACTGTCTCAGGAAGTTGAAGAGATTCCTTTCGAGGATCTTAAGGCCTTTGCAAAATCCTTAGAAAAACTGAAGCGAATGTCCTCGCCCGTCGTGACACGATG 317 0.4543 MKTRSVSKHKQGIFNDACELSVLCKAQTAVIAFSPNFDKDGVQTFGNPNPDSVINRYIHAGDDDRAWEEIAKLSQEVEEIPFEDLKAFAKSLEKLKRMSSPVVTR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02165 105 ProSiteProfiles MADS-box domain profile. 1 36 IPR002100 GO:0003677|GO:0046983
Bva02g02165 105 PANTHER MADS BOX PROTEIN 6 65 - -
Bva02g02165 105 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 6 36 IPR002100 GO:0003677|GO:0046983
Bva02g02165 105 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 6 65 - -
Bva02g02165 105 SUPERFAMILY SRF-like 4 77 IPR036879 GO:0003677|GO:0046983
Bva02g02165 105 Gene3D - 2 66 IPR036879 GO:0003677|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02165 1 69 Type I MADS-box Gene Family AT2G34440 37.838 3.96e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bva02g02165 SRF-TF 1.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02165 - K09264 cpap:110819069 62.7734