Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02160 ATGTGGTGGAGATCAGCATCTTTCATTCTCGACAAGCAGCAAAACGACGCCGCTTTGAAGCCCGACACTATCTCAATCTCTCCCCCTCCGGATGCTACTGCCCACTCTTCCATGGCGGATACCTTTCAGAACCCTAATCCTAACCCTAAAATCTCCGCTTACTATCAAACCAGGGCGCAACACCATGGCGTCGTCACCAGCGATTGGCTTTCCCAGGCTCAGGCTGCTATTGACCAGAACCCAGATGATCATGGAATTTCAGCAGATGAAGTCAGAGTGGCCGATCCTGGCAAGCCCTTTAGTGTGATTGACGAATTTAATAACTGGCGGAAACAGCCCGATTTAGCCGAGGCCGTTGCGGCGATTCGCGCCTTGGCGGCGGTGATTAGGTCTAGTAAGGCCACGACTATGATGGAGCTGGAAATTGAGCTCAAGAAGGCCTCTGATTCTCTCAAATCATGGGATGCAACTTCTATCTCTTTGACAGCTGGCTGTGATCTGTTCATGCGATATGTGACCAGAACTTCTGCTTTAGAATACGAAGACTTTAATTCAGCAAGGTCTCGCTTGATTGAACGTGCTGAAAAGTTTGGGGAAATATCACAAAAGGCTCGCAGAATTATTGCAATGCTGAGtcaagattttatatttgacgGTTGTACAATTTTGGTTCATGGTTTTTCTAGAGTTGTCTTAGAAGTTCTGAAATTGGCAGCTCAAAATAAGAAACTGTTTCGGGTTTTCTGCACAGAGGGAAGACCAGATCGAACAGGTTTACGGTTGTCCAATGAACTCGCCAAGCTTGATGTTCCTGTGAAACTCCTAATAGACTCTGCAGTGGCATATACTATGGATGAGGTGGACATGGTTTTTGTGGGGGCAGATGGAGTAGTCGAAAGTGGGGGTATACTTAACATGATGGGAACATACCAAATTGCATTGGTTGCTCACAGCATGAATAAACCAGTTTATGTGGCTGCCGAAAGCTATAAGTTTGCTCGTCTTTACCCATTGGATCAGAAGGATTTAGCCCCTGCCTTACGTCCTATTGATTTTGGCGTACCAATTCCATCCAAGGTTGAGGTTGAAAAGTCCGCCCGGGATTATACACCTCCTCAATATCTAACTCTTCTTTTCACAGATTTGGGTGTTCTTACTCCATCCGTCGTTAGTGATGAACTCATCCAGCTATACTtata 1199 0.4537 MWWRSASFILDKQQNDAALKPDTISISPPPDATAHSSMADTFQNPNPNPKISAYYQTRAQHHGVVTSDWLSQAQAAIDQNPDDHGISADEVRVADPGKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSKATTMMELEIELKKASDSLKSWDATSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISQKARRIIAMLSQDFIFDGCTILVHGFSRVVLEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGILNMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02160 399 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 50 399 - -
Bva02g02160 399 Pfam Initiation factor 2 subunit family 113 387 IPR000649 GO:0044237
Bva02g02160 399 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 50 399 - -
Bva02g02160 399 SUPERFAMILY NagB/RpiA/CoA transferase-like 115 398 IPR037171 -
Bva02g02160 399 MobiDBLite consensus disorder prediction 28 49 - -
Bva02g02160 399 Gene3D - 99 200 IPR042528 -
Bva02g02160 399 MobiDBLite consensus disorder prediction 29 49 - -
Bva02g02160 399 Coils Coil 137 157 - -
Bva02g02160 399 Gene3D - 203 399 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02160 Bva-Chr2 22015700 22018571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02160 1 399 Eukaryotic Initiation Factors Gene Family AT1G53880 80.250 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02160 K03239 - zju:107435090 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02160 02 22015700 22018571 Bva02g02160 02 22015700 22018571 ECH