Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02154 ATGGATTCCATTAACTCCTTTAAGGGATACGGTAAGGTAGATGAGCTGGAGCAGCAAGCATTCCATAAGAAGACACGGAAGCGCATCATCATACTCCTCGTCTCCTCCATAATACTAGTAGCCGTCATCGTCGCCGCAGTTGCAGGAGTCCTCATACATAAGCGCAATAGCTCCTCATCTTCCGATAATTCCGTCCCTTCCAGCGGCTTAACTCCGGCATCCTCACTCAAAGCGGTCTGCGATGTCACTCTGTACCCCGATTCCTGCTATTCCAGCATCTCATCGCTTCCCAACTCCAACACCACCGACCCGGAACTCCTCTTCAAGCTCTCTCTCCGTGTCGCCGTCAACGAGCTAGCCAAGCTCTCGCAGTACACTTCAAAGATCAATGCTCAGGAACCCCGTCTTCAGGAGGCCATTGATGTTTGTGCGACCGTTCTCGATGATGCGCTGGATCGACTCAACGAGTCGATTTCGTCTCTGGAAATCGGTGGCGGCGGCGAGAAACTCTTGTCCACGGCGAAGATCTCCGACCTTAGAACCTGGCTCACCGCCACCATTACCGATCAAGAAACCTGTTTGGATGCTCTAGAGGAATTGAACTCCACTGCGGGGAATAAAACTCTTCTCGATGTGAGAACCGCCATGGCCAACTCCACCCAGTTCGCGAGCAACAGTTTGGCCATTGCCACCAAGATTCTCGTTCTGCTTGGGGAAATTGGCATTCCGATCCATCGGAGGCTACTCGGGTTCGGAGGATCCGAATCCGGATTTCCGGATTGGGTCGGCCCGGATGAGAGGAGGCTGTTGCAGGAGAACACAACGACAGCGGATTTGGTGGTGGCCCAGGACGGGAGCGGGAAATTTAAGACGATCAGAGAGGCATTGGCGACGGTGCCGAAGAAGAGTAAGACGAGGCATGTAATTTACGTGAAGGAAGGGGTGTATTCGGAGAAGATAGATTTGGACAAGAACACATGGAATGTGATGATTTACGGAGACGGAAAGGACAAAACCGTCGTCACCGGCAGCTTGAACTTCGTCGATGGCACACCCACATTTGCCACTGCAACTTTTGCTGTGAAGGGGAAGGGATTCATTGCCAGGGACATAGCCTTCAAAAACACCGCAGGTCCAGCCAAGCATCAGGCTGTGGCCTTCAGATCAGGCTCAGACATGTCTGTGTTCTATAGATGCTTATTCGATGGATTCCAGGACACTCTCTATGCCCATTCCAACCGCCAATTCTACCGCGATTGCGACATTACAGGTACCGTAGACTTCATATTTGGCAATGCAGCTGTTGTGTTCCAAAACTGCAATATTATGCCAAGGCAGCCCCTGCCAAACCAGTTCAACACCATCACAGCTCAGGGCAAGAAAGATCCAAACCAGAACTCTGCCATATCCATCCAGAAGTGTAAATTCTCTGCATTTGATAAGCTTACCGCTCCAACATACCTTGGCAGGCCTTGGAAAGAATTTTCCACCACTGTCATCATGCAATCTGATATCGGGTCATTTTTGAACCCATTGGGCTGGATATCATGGATCCCTAATGTCGAACCGGCCAATACAATACTTTATGGAGAATATCAGAACTCTGGGCCTGGATCAGGTTTGGAGAAACGGGTTAAATGGGCTGGTTATAAGCCCACTCTCACAGATGTTGAGGCGGGGAAGTTCACTGTGGAATCCTTAATCCAAGGAAGTGAATGGTTGCCCTTGGCAGATTCCTCTATGCGTTATGACTCTAAGTTGTG 1763 0.5037 MDSINSFKGYGKVDELEQQAFHKKTRKRIIILLVSSIILVAVIVAAVAGVLIHKRNSSSSSDNSVPSSGLTPASSLKAVCDVTLYPDSCYSSISSLPNSNTTDPELLFKLSLRVAVNELAKLSQYTSKINAQEPRLQEAIDVCATVLDDALDRLNESISSLEIGGGGEKLLSTAKISDLRTWLTATITDQETCLDALEELNSTAGNKTLLDVRTAMANSTQFASNSLAIATKILVLLGEIGIPIHRRLLGFGGSESGFPDWVGPDERRLLQENTTTADLVVAQDGSGKFKTIREALATVPKKSKTRHVIYVKEGVYSEKIDLDKNTWNVMIYGDGKDKTVVTGSLNFVDGTPTFATATFAVKGKGFIARDIAFKNTAGPAKHQAVAFRSGSDMSVFYRCLFDGFQDTLYAHSNRQFYRDCDITGTVDFIFGNAAVVFQNCNIMPRQPLPNQFNTITAQGKKDPNQNSAISIQKCKFSAFDKLTAPTYLGRPWKEFSTTVIMQSDIGSFLNPLGWISWIPNVEPANTILYGEYQNSGPGSGLEKRVKWAGYKPTLTDVEAGKFTVESLIQGSEWLPLADSSMRYDSKL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02154 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 233 IPR035513 -
Bva02g02154 587 Pfam Plant invertase/pectin methylesterase inhibitor 75 229 IPR006501 GO:0004857
Bva02g02154 587 SMART PMEI_2 71 229 IPR006501 GO:0004857
Bva02g02154 587 CDD PMEI-like_3 78 233 - -
Bva02g02154 587 PANTHER PECTINESTERASE 8 581 - -
Bva02g02154 587 Pfam Pectinesterase 278 570 IPR000070 GO:0030599|GO:0042545
Bva02g02154 587 Gene3D - 272 584 IPR012334 -
Bva02g02154 587 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 232 IPR006501 GO:0004857
Bva02g02154 587 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Bva02g02154 587 PANTHER PECTINESTERASE 1-RELATED 8 581 - -
Bva02g02154 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 233 IPR035513 -
Bva02g02154 587 SUPERFAMILY Pectin lyase-like 275 577 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02154 Bva-Chr2 21982391 21985779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02154 1 575 Carbohydrate Esterase AT1G53840 58.291 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02154 - - gmx:100784642 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02154 02 21982391 21985779 Bva02g02154 02 21982391 21985779 ECH