Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02153 ATGAGAAAGATAAGGCAAGTCTTCGCCGGAATATCAAATTCCGGCAAGGACTTTTCCAtgtctaaaaagaaaaaaaacctCTTTTTAGCCCTGTTTGCCACTCTGTTTCTTGTTGCTGCCGTTGTCGGCATTGTCGCCGGAGTTAACTCCCACAAGAACTCCAACTCGGGCGACAGCGACGTACTTTCGGCCCAATCGCATCCCGTAATCAGAACCTCTTGCAGCAGCACACTGTACCCAGAACTGTGCTTCTCTGCCATTGCCTCTGAACCTGGGTTTGCGCAGAAAGCCAAAAGCGGGAAAGATGTTATTGAATTGTACCTTAACATCACCGAAAGAGCTGTTGAGCACAATTTCAACATCATTGAGAAGCTGGTCACCATAAAGAGCCTCACAAAGAGGGAAAAAACTGCTCTGCATGATTGCTTGGAGACCATTGATGAGACCCTCGACGAGATTCATAAGACCAAGGATGATCTCAAAGTGTATCCATCGAAGAAGTCTCTGTCCCAACACGCAGACGACCTCAAGACCCTCATCAGTTCCGCCATAACCAACCAAGAGACTTGCTTGGATGGGTTTTCTCACGACAACGCAGACAAGAAAGTGAGGAAAGCTCTGGAGAAAGGGCTCGTGCATGTCGAGAAAATGTGCAGCAACGCACTGGCCATGATCAAGAACATGACCGATGGTGACATTGCCGATTatgagaagaagatgaaaattacAAGCAGGAAGCTGGTGGAGCTTCAGGAGGAGGACCAAAGTGGGATTAAGTGGCCAGAATGGATGTCGGCGGCGGACAGGCACCTTTTGCAGTCGTCCACCGTGACCCCGGACGTTGTTGTGGCGGCAGACGGCAGCGGAAACTTTAAGACAGTGTCGGCTGCGGTGGCGGCTGCCCCTCAGGGGAGTAGCAAGAGATATGTCATCAGGATAAAAGCAGGTGTGTACAGAGAAAATGTGGAGGTGCCCAAGAAGAAGACCAATATTATGTTATTGGGAGATGGAAGAACTACGACGATTATCACAGGAAGCAGAAATGTGGTTGACGGAAGCACAACCTTCAACTCCGCCACAGTTGCCGTAGTGGGAGAAAGATTCCTAGCACGAGACATAACGTTCCAAAACACAGCTGGTCCCTCAAAGCACCAAGCAGTGGCACTCAGAGTGGGTGCTGATCTCTCCGCCTTCTACCGCTGTGACATTCTTGCCTACCAAGACACACTCTATGTCCACAACAACCGCCAATTCTTCGTAGGTTGTCTCATTGCCGGCACGGTGGATTTCATATTCGGCAACTCAGCCGTCGTTCTCCAAGACTGTGACATCCACGCTCGGCGTCCCAACTCAGGCCAAAAGAACATGGTGACAGCACAAGGGCGCGTTGACCCTAACCAGAACACAGGCATTGTGATTCAGAACAGTAGAATTGGTGCCACCAAGGATTTGGAGCCTGTCAAGGGAAGCTTCCCAACCTACCTTGGAAGGCCATGGAAGGAGTACTCTAGGACTGTGATCATGCAATCAACCATAAGTGATGTGATTGCAGCAGCAGGGTGGCACGAGTGGAGTGGCACTTTTGCATTGAACACTTTGTTCTACGGGGAATATCAGAACACTGGACCCGGTGCTGGTACCTCTGGGAGGGTCAAGTGGAAGGGGTTTAAGGTCATTACAAGTGCTACGGAGGCCCAGGCTTATACTCCTGGTAGGTTCATTGCAGGCTCTGGTTGGTTGGGCTCTACAGGGTTTCCCTTCGCCCTTGGGCTCTA 1775 0.4963 MRKIRQVFAGISNSGKDFSMSKKKKNLFLALFATLFLVAAVVGIVAGVNSHKNSNSGDSDVLSAQSHPVIRTSCSSTLYPELCFSAIASEPGFAQKAKSGKDVIELYLNITERAVEHNFNIIEKLVTIKSLTKREKTALHDCLETIDETLDEIHKTKDDLKVYPSKKSLSQHADDLKTLISSAITNQETCLDGFSHDNADKKVRKALEKGLVHVEKMCSNALAMIKNMTDGDIADYEKKMKITSRKLVELQEEDQSGIKWPEWMSAADRHLLQSSTVTPDVVVAADGSGNFKTVSAAVAAAPQGSSKRYVIRIKAGVYRENVEVPKKKTNIMLLGDGRTTTIITGSRNVVDGSTTFNSATVAVVGERFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDILAYQDTLYVHNNRQFFVGCLIAGTVDFIFGNSAVVLQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQNSRIGATKDLEPVKGSFPTYLGRPWKEYSRTVIMQSTISDVIAAAGWHEWSGTFALNTLFYGEYQNTGPGAGTSGRVKWKGFKVITSATEAQAYTPGRFIAGSGWLGSTGFPFALGL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02153 591 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Bva02g02153 591 Pfam Plant invertase/pectin methylesterase inhibitor 69 224 IPR006501 GO:0004857
Bva02g02153 591 PANTHER PECTINESTERASE 22 590 - -
Bva02g02153 591 SMART PMEI_2 65 224 IPR006501 GO:0004857
Bva02g02153 591 SUPERFAMILY Pectin lyase-like 275 590 IPR011050 -
Bva02g02153 591 Pfam Pectinesterase 280 576 IPR000070 GO:0030599|GO:0042545
Bva02g02153 591 CDD PMEI-like_3 72 229 - -
Bva02g02153 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 40 228 IPR006501 GO:0004857
Bva02g02153 591 PANTHER PECTINESTERASE 22 590 - -
Bva02g02153 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 229 IPR035513 -
Bva02g02153 591 ProSitePatterns Pectinesterase signature 1. 305 324 IPR018040 -
Bva02g02153 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 229 IPR035513 -
Bva02g02153 591 Gene3D - 273 591 IPR012334 -
Bva02g02153 591 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02153 Bva-Chr2 21976945 21981004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02153 19 591 Carbohydrate Esterase AT3G14310 71.210 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02153 K01051 - pop:7471606 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02153 02 21976945 21981004 Bva02g02153 02 21976945 21981004 ECH