LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g02153	ATGAGAAAGATAAGGCAAGTCTTCGCCGGAATATCAAATTCCGGCAAGGACTTTTCCAtgtctaaaaagaaaaaaaacctCTTTTTAGCCCTGTTTGCCACTCTGTTTCTTGTTGCTGCCGTTGTCGGCATTGTCGCCGGAGTTAACTCCCACAAGAACTCCAACTCGGGCGACAGCGACGTACTTTCGGCCCAATCGCATCCCGTAATCAGAACCTCTTGCAGCAGCACACTGTACCCAGAACTGTGCTTCTCTGCCATTGCCTCTGAACCTGGGTTTGCGCAGAAAGCCAAAAGCGGGAAAGATGTTATTGAATTGTACCTTAACATCACCGAAAGAGCTGTTGAGCACAATTTCAACATCATTGAGAAGCTGGTCACCATAAAGAGCCTCACAAAGAGGGAAAAAACTGCTCTGCATGATTGCTTGGAGACCATTGATGAGACCCTCGACGAGATTCATAAGACCAAGGATGATCTCAAAGTGTATCCATCGAAGAAGTCTCTGTCCCAACACGCAGACGACCTCAAGACCCTCATCAGTTCCGCCATAACCAACCAAGAGACTTGCTTGGATGGGTTTTCTCACGACAACGCAGACAAGAAAGTGAGGAAAGCTCTGGAGAAAGGGCTCGTGCATGTCGAGAAAATGTGCAGCAACGCACTGGCCATGATCAAGAACATGACCGATGGTGACATTGCCGATTatgagaagaagatgaaaattacAAGCAGGAAGCTGGTGGAGCTTCAGGAGGAGGACCAAAGTGGGATTAAGTGGCCAGAATGGATGTCGGCGGCGGACAGGCACCTTTTGCAGTCGTCCACCGTGACCCCGGACGTTGTTGTGGCGGCAGACGGCAGCGGAAACTTTAAGACAGTGTCGGCTGCGGTGGCGGCTGCCCCTCAGGGGAGTAGCAAGAGATATGTCATCAGGATAAAAGCAGGTGTGTACAGAGAAAATGTGGAGGTGCCCAAGAAGAAGACCAATATTATGTTATTGGGAGATGGAAGAACTACGACGATTATCACAGGAAGCAGAAATGTGGTTGACGGAAGCACAACCTTCAACTCCGCCACAGTTGCCGTAGTGGGAGAAAGATTCCTAGCACGAGACATAACGTTCCAAAACACAGCTGGTCCCTCAAAGCACCAAGCAGTGGCACTCAGAGTGGGTGCTGATCTCTCCGCCTTCTACCGCTGTGACATTCTTGCCTACCAAGACACACTCTATGTCCACAACAACCGCCAATTCTTCGTAGGTTGTCTCATTGCCGGCACGGTGGATTTCATATTCGGCAACTCAGCCGTCGTTCTCCAAGACTGTGACATCCACGCTCGGCGTCCCAACTCAGGCCAAAAGAACATGGTGACAGCACAAGGGCGCGTTGACCCTAACCAGAACACAGGCATTGTGATTCAGAACAGTAGAATTGGTGCCACCAAGGATTTGGAGCCTGTCAAGGGAAGCTTCCCAACCTACCTTGGAAGGCCATGGAAGGAGTACTCTAGGACTGTGATCATGCAATCAACCATAAGTGATGTGATTGCAGCAGCAGGGTGGCACGAGTGGAGTGGCACTTTTGCATTGAACACTTTGTTCTACGGGGAATATCAGAACACTGGACCCGGTGCTGGTACCTCTGGGAGGGTCAAGTGGAAGGGGTTTAAGGTCATTACAAGTGCTACGGAGGCCCAGGCTTATACTCCTGGTAGGTTCATTGCAGGCTCTGGTTGGTTGGGCTCTACAGGGTTTCCCTTCGCCCTTGGGCTCTA	1775	0.4963	MRKIRQVFAGISNSGKDFSMSKKKKNLFLALFATLFLVAAVVGIVAGVNSHKNSNSGDSDVLSAQSHPVIRTSCSSTLYPELCFSAIASEPGFAQKAKSGKDVIELYLNITERAVEHNFNIIEKLVTIKSLTKREKTALHDCLETIDETLDEIHKTKDDLKVYPSKKSLSQHADDLKTLISSAITNQETCLDGFSHDNADKKVRKALEKGLVHVEKMCSNALAMIKNMTDGDIADYEKKMKITSRKLVELQEEDQSGIKWPEWMSAADRHLLQSSTVTPDVVVAADGSGNFKTVSAAVAAAPQGSSKRYVIRIKAGVYRENVEVPKKKTNIMLLGDGRTTTIITGSRNVVDGSTTFNSATVAVVGERFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDILAYQDTLYVHNNRQFFVGCLIAGTVDFIFGNSAVVLQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQNSRIGATKDLEPVKGSFPTYLGRPWKEYSRTVIMQSTISDVIAAAGWHEWSGTFALNTLFYGEYQNTGPGAGTSGRVKWKGFKVITSATEAQAYTPGRFIAGSGWLGSTGFPFALGL	591

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bva02g02153	591	ProSitePatterns	Pectinesterase signature 2.	424	433	IPR033131	-
Bva02g02153	591	Pfam	Plant invertase/pectin methylesterase inhibitor	69	224	IPR006501	GO:0004857
Bva02g02153	591	PANTHER	PECTINESTERASE	22	590	-	-
Bva02g02153	591	SMART	PMEI_2	65	224	IPR006501	GO:0004857
Bva02g02153	591	SUPERFAMILY	Pectin lyase-like	275	590	IPR011050	-
Bva02g02153	591	Pfam	Pectinesterase	280	576	IPR000070	GO:0030599\|GO:0042545
Bva02g02153	591	CDD	PMEI-like_3	72	229	-	-
Bva02g02153	591	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	40	228	IPR006501	GO:0004857
Bva02g02153	591	PANTHER	PECTINESTERASE	22	590	-	-
Bva02g02153	591	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	68	229	IPR035513	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g02153	Bva-Chr2	21976945	21981004	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva02g02153	19	591	Carbohydrate Esterase	AT3G14310	71.210	0.0	819

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g02153	K01051		-	pop:7471606	855.129

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva02g02153	02	21976945	21981004	Bva02g02153	02	21976945	21981004	ECH

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