Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02149 ATGGCTGACTCACAAGACGGTTCGGCTGAACCTGAGGGCTTTGGAGTCCTTGCGATCATTATGGTGTCAATCATAATGATGATCTTCTTGGTGgttgtgtttatatttttcctctaTCTCTACGCCAAATGGTGCCGGCTGCGCGCTGAACAAACCGCCACTGGAAGCCGCCGTCGCAGGCGATTGGTCTTTGCCGCCGGTCCAGACCCACGAGGCCAGAGAAGAGGGCTCGATCCCGAAATCCTTAGCTCCTTACCAGTGTTAATTTTCCAGCAAGAAGAGTTCAAAGATGGTTTGGAATGTGCTGTTTGCCTCTCTGAGCTTGTTCAAGGAGAAAAGGCAAGGCTTTTACCTAAATGCAATCATGGGTTTCACGCAGGCTGCATAGATATGTGGTTCCAATCTCACTCTACCTGCCCAATTTGTAGAAACCCAGTTGCTTCTGAGTCCTCAGAACGAAGTACTAATTCTGGCGTTGAAGAAAATGCCTCTGAGAATGATAGTCAATCATCAAACTCAGATGTGAGTAGTTCAGTATCTCCAGTTTATGGAAACCAGCCTCAAGCATGTTCTATTGGTGCTACTTCGGAAGAAAAACGTCCTTCTCTTCAACCACCTTGCTCATCATCGTGTACCTCATCTTCCTCAGCAGGTACTAGTGGTAATAAGGATCATGGAATGTTGATGATTGATATACCAAGTGAGATCAATCCGTCGTCTTCATTGCCCTCTTCGAGCAGATTTGCTGAAGACGAGCTGATATCACCAATGATGACGAGTTTGAAGTCATTCAAGAGGCTTTTAAGCTGGAACAAAAGATCGGGTCCATTCAGTCCCGGATCTGTGGATGTGGAACAAGCCGGGAAAGCAGAAAACTA 878 0.4567 MADSQDGSAEPEGFGVLAIIMVSIIMMIFLVVVFIFFLYLYAKWCRLRAEQTATGSRRRRRLVFAAGPDPRGQRRGLDPEILSSLPVLIFQQEEFKDGLECAVCLSELVQGEKARLLPKCNHGFHAGCIDMWFQSHSTCPICRNPVASESSERSTNSGVEENASENDSQSSNSDVSSSVSPVYGNQPQACSIGATSEEKRPSLQPPCSSSCTSSSSAGTSGNKDHGMLMIDIPSEINPSSSLPSSSRFAEDELISPMMTSLKSFKRLLSWNKRSGPFSPGSVDVEQAGKAEN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02149 292 SUPERFAMILY RING/U-box 81 149 - -
Bva02g02149 292 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Bva02g02149 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 153 IPR013083 -
Bva02g02149 292 MobiDBLite consensus disorder prediction 145 222 - -
Bva02g02149 292 MobiDBLite consensus disorder prediction 145 227 - -
Bva02g02149 292 MobiDBLite consensus disorder prediction 273 292 - -
Bva02g02149 292 SMART ring_2 101 142 IPR001841 -
Bva02g02149 292 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 285 IPR044675 -
Bva02g02149 292 Pfam Ring finger domain 100 143 IPR001841 -
Bva02g02149 292 PANTHER RING-H2 FINGER PROTEIN ATL3 12 285 - -
Bva02g02149 292 CDD RING-H2_EL5_like 100 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02149 Bva-Chr2 21959068 21961002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02149 12 272 C3H Transcription Factor Family AT1G53820 38.435 1.00e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02149 - - zju:107434456 237.654