Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva02g02147 | ATGGGCGACGCGTATAAAGGTTTGAATGATTCTTCGGCCGTTGAAGTAACCGGCAAGATCATGGTAGTAGCTATAATAATCCTCTTCTTTGTGGTTGTGTTTGTTCTCTTCCTACATCTCTATGCCAGATGGTTCTGGTGGCGCATTGAAGAAACCACCTCTCCTCACCCTCGCAGTCGCCGTCGCCGCCGGTTCGTCTTCGCCCCCGGTCAAGACCCAGCAATCTACGGAGCTCACCGAAGTGGGCTCGACCCCGCTGTCCTTAGGTCCTTGCCTGTCTTAGTGTTCCAACCCAAAGAGTTCAAAGATGGGTTGGAATGCGCTGTTTGCCTCTCTGAGCTTGTTCAAGGAGAAAAGGCTAGGATTTTACCCGAATGCAATCATGGGTTTCACGTAGATTGCATAGATATGTGGTTCCAATCCCATTCCACATGCCCCCTTTGTAGGAGCCATGTCGATTCTGGATCCTCAAAACCCAGTGGTAGTTCAGATGCTAGAGAAAATGCCTCTGAGAACACTGAATCACCAGTGGCAGAAAATTCAGCTGCTTTGAGTAGTTCTGAGTCTCCAAATTTTCCCACAAATGTATTAATTTGGGGGAACCAGACCCAAGTAAGTTCTGTTGGTGCTTCCTTGGAAGTAGAAGGTCCTTCTCCTCAACCTCCTTGCTCCTCATCATCTACCACTCAATCTTCTTCTTCCGCGACTACTAGCAGTAACAGACATCATGGAACATTGGTGATTGATATACCAAGTGAGATCAATTCATCGGCTTTATCACCTTCTGCGAGCAGGTTTGCTGAAGACGAGCTGAAATCACCAATGACAACGAGGTTGAGGTCATTGAAGAGACTTTTAAGCAGAGACAAGAGATTGTTAAGTCCTTGTAGTCCCAATTCTATAGATGTGGAACAAGGCGGGAGAGGACAGAGCTA | 935 | 0.4727 | MGDAYKGLNDSSAVEVTGKIMVVAIIILFFVVVFVLFLHLYARWFWWRIEETTSPHPRSRRRRRFVFAPGQDPAIYGAHRSGLDPAVLRSLPVLVFQPKEFKDGLECAVCLSELVQGEKARILPECNHGFHVDCIDMWFQSHSTCPLCRSHVDSGSSKPSGSSDARENASENTESPVAENSAALSSSESPNFPTNVLIWGNQTQVSSVGASLEVEGPSPQPPCSSSSTTQSSSSATTSSNRHHGTLVIDIPSEINSSALSPSASRFAEDELKSPMTTRLRSLKRLLSRDKRLLSPCSPNSIDVEQGGRGQS | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva02g02147 | 311 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 6 | 305 | IPR044675 | - | |
Bva02g02147 | 311 | PANTHER | RING-H2 FINGER PROTEIN ATL3 | 6 | 305 | - | - | |
Bva02g02147 | 311 | MobiDBLite | consensus disorder prediction | 208 | 243 | - | - | |
Bva02g02147 | 311 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 155 | IPR013083 | - | |
Bva02g02147 | 311 | SUPERFAMILY | RING/U-box | 87 | 154 | - | - | |
Bva02g02147 | 311 | ProSiteProfiles | Zinc finger RING-type profile. | 107 | 149 | IPR001841 | - | |
Bva02g02147 | 311 | MobiDBLite | consensus disorder prediction | 291 | 311 | - | - | |
Bva02g02147 | 311 | CDD | RING-H2_EL5_like | 106 | 149 | - | - | |
Bva02g02147 | 311 | Pfam | Ring finger domain | 106 | 149 | IPR001841 | - | |
Bva02g02147 | 311 | MobiDBLite | consensus disorder prediction | 150 | 189 | - | - | |
Bva02g02147 | 311 | SMART | ring_2 | 107 | 148 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva02g02147 | Bva-Chr2 | 21954021 | 21955668 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva02g02147 | 15 | 290 | C3H Transcription Factor Family | AT1G53820 | 46.622 | 1.62e-73 | 227 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva02g02147 | - | - | zju:107434456 | 323.168 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva02g02147 | 02 | 21954021 | 21955668 | Bva02g02147 | 02 | 21954021 | 21955668 | ECH |