Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02147 ATGGGCGACGCGTATAAAGGTTTGAATGATTCTTCGGCCGTTGAAGTAACCGGCAAGATCATGGTAGTAGCTATAATAATCCTCTTCTTTGTGGTTGTGTTTGTTCTCTTCCTACATCTCTATGCCAGATGGTTCTGGTGGCGCATTGAAGAAACCACCTCTCCTCACCCTCGCAGTCGCCGTCGCCGCCGGTTCGTCTTCGCCCCCGGTCAAGACCCAGCAATCTACGGAGCTCACCGAAGTGGGCTCGACCCCGCTGTCCTTAGGTCCTTGCCTGTCTTAGTGTTCCAACCCAAAGAGTTCAAAGATGGGTTGGAATGCGCTGTTTGCCTCTCTGAGCTTGTTCAAGGAGAAAAGGCTAGGATTTTACCCGAATGCAATCATGGGTTTCACGTAGATTGCATAGATATGTGGTTCCAATCCCATTCCACATGCCCCCTTTGTAGGAGCCATGTCGATTCTGGATCCTCAAAACCCAGTGGTAGTTCAGATGCTAGAGAAAATGCCTCTGAGAACACTGAATCACCAGTGGCAGAAAATTCAGCTGCTTTGAGTAGTTCTGAGTCTCCAAATTTTCCCACAAATGTATTAATTTGGGGGAACCAGACCCAAGTAAGTTCTGTTGGTGCTTCCTTGGAAGTAGAAGGTCCTTCTCCTCAACCTCCTTGCTCCTCATCATCTACCACTCAATCTTCTTCTTCCGCGACTACTAGCAGTAACAGACATCATGGAACATTGGTGATTGATATACCAAGTGAGATCAATTCATCGGCTTTATCACCTTCTGCGAGCAGGTTTGCTGAAGACGAGCTGAAATCACCAATGACAACGAGGTTGAGGTCATTGAAGAGACTTTTAAGCAGAGACAAGAGATTGTTAAGTCCTTGTAGTCCCAATTCTATAGATGTGGAACAAGGCGGGAGAGGACAGAGCTA 935 0.4727 MGDAYKGLNDSSAVEVTGKIMVVAIIILFFVVVFVLFLHLYARWFWWRIEETTSPHPRSRRRRRFVFAPGQDPAIYGAHRSGLDPAVLRSLPVLVFQPKEFKDGLECAVCLSELVQGEKARILPECNHGFHVDCIDMWFQSHSTCPLCRSHVDSGSSKPSGSSDARENASENTESPVAENSAALSSSESPNFPTNVLIWGNQTQVSSVGASLEVEGPSPQPPCSSSSTTQSSSSATTSSNRHHGTLVIDIPSEINSSALSPSASRFAEDELKSPMTTRLRSLKRLLSRDKRLLSPCSPNSIDVEQGGRGQS 311
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02147 311 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 6 305 IPR044675 -
Bva02g02147 311 PANTHER RING-H2 FINGER PROTEIN ATL3 6 305 - -
Bva02g02147 311 MobiDBLite consensus disorder prediction 208 243 - -
Bva02g02147 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 155 IPR013083 -
Bva02g02147 311 SUPERFAMILY RING/U-box 87 154 - -
Bva02g02147 311 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Bva02g02147 311 MobiDBLite consensus disorder prediction 291 311 - -
Bva02g02147 311 CDD RING-H2_EL5_like 106 149 - -
Bva02g02147 311 Pfam Ring finger domain 106 149 IPR001841 -
Bva02g02147 311 MobiDBLite consensus disorder prediction 150 189 - -
Bva02g02147 311 SMART ring_2 107 148 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva02g02147 Bva-Chr2 21954021 21955668 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02147 15 290 C3H Transcription Factor Family AT1G53820 46.622 1.62e-73 227
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02147 - - zju:107434456 323.168
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02147 02 21954021 21955668 Bva02g02147 02 21954021 21955668 ECH