Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02141 ATGTTGGAGAATCGGAGGCTGGTGCTGATGTTCATCGGCACCTGCATTCTGGGTTGGATGCTCATTGCCATCAATGGTGCCACAGATCCAGGCGACGTTGCTGCTGTAAAGGTTCTGTATAATAGTATGAACTCACCGTCCCAGCTTGGTTGGAATGGTGATGATCCATGTGGACAGAATTGGAAAGGCATTACTTGCTCAGGCAATCGAATCACAGAGATTAAGTTGCCTGGTCTTGGACTTGCTGGATCATTGGGCTACCAGTTACAAACTTTGACATCCTTGACCATCCTAGACCTGAGTAACAATAATCTTGGAAATGACCTACCATATCAACTTCCTCCAAATGTGACACAATTAAATCTTGCTAATAATCAATTTACTGGTGGTGTCCCCTACTCTATTTCTGATATGACTTCTCTTACTAATCTGAATCTTGGTCACAATCAGTTTCGGGGCCAACTAAATGACATGTTTACGAagctttcttctctctccatATTGGACCTCTCTTTCAATTCTTTGTCGGGCAACCTCCCTCAGAGTTTCAGCTCACTTTCAAACATAAAGACCATGTATCTGCAAAACAACCAGTTTACTGGCACCATTGATGTTCTTGCCACTCTGCCTCTTGACAATTTGAATGTGCAAAACAACCATTTCACGGGCTGGATACCTGAGCAGTTGAAAAGCATAAACCTTCAGAAGGATGGTAATGCTTGGAATTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCCCCTGCAACAAGAAACAACCGAAATCACGGATCTGGTGGAAGTAATGGAAGCCCGTCAGATGCTGATTCTAGTGATGGGGGGAAAAAATCTGGTATAGGAGGAGGTGGTATTGCTGGAATAATTATCTCTATCCTCGTAGTTGGGGCAATAGTGGCATTCTTTCtggtaaagaaaaaatccaGGAAGTCATCTTTGGACCCAGAAAAGATAGACAATCAGCCTCTTACTTCAAGTGTAGTGCATGAAGCTAAGTCTGTGCAAACTTCCTCTATAATTGACATGAAGACATTTGATACTTCGGCTGcaataaatcttaaaccccCACCTATTGAGCGCCACAAATCatttgatgaagatgaattttCAAAGAAGCCCATTATTGCGAAGAAGACTGTAACAGCTCCCGCCAATGTGAAATCATACTCTATAGCAGATCTGCAGATAGCTACTGGTAGCTTCAGTATGGATCAGCTACTTGGTGAGGGATCTTTCGGGCGTGTTTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCTTCTGTCCTTTCTAATGAAAGGTCTGACGATTTTATGGAAGTAGTTTCAAACATCTCCCAGTTGCATGATCCAAATGTGACAGAGCTTGTTGGTTATTGTTCGGAGCATGGACAACACCTCCTTGTATACGAGTTTCATAAAAATGGATCACTGCATGATTTCCTTCACCTTTCAGATGAGTATAGCAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGGACTGCAAGAGCTTTAGAGTACCTGCATGAAGCTTGTTCACCATCAGTTGTTCACAAGAATATTAAGTCAGCAAACATATTACTTGATGTGGAGCTTAATCCTCATCTTTCAGACGCTGGACTGGCGAGCTATATTCCAAATGCAGACCAGATATTAAACCGTAATGCTGGTTCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACATTGAAGAGTGATGTCTACAGCTTTGGAGTTGTTATGCTGGAGCTTCTTAGTGGGAGGAAGCCGTTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCGCAACTCCATGATATTGATGCACTGGCAAAAATGGTTGATCCTGCACTGAAAGGGCTATACCCTGTCAAGTCGCTATCTCGGTTTGCTGATGTTATTGCGCTTTGCGTTCAGCCGGAACCTGAATTCCGACCACCTATGTCTGAAGTGGTTCAAGCTCTGGTCCGATTGGTGCAGCGAGCTAACATGAGCAAGCGTACATTTGGAACTGATCAAGGAGGGTCCAACCGAGGTGAGGACCCCGAGACACAAGACATGTA 2135 0.4286 MLENRRLVLMFIGTCILGWMLIAINGATDPGDVAAVKVLYNSMNSPSQLGWNGDDPCGQNWKGITCSGNRITEIKLPGLGLAGSLGYQLQTLTSLTILDLSNNNLGNDLPYQLPPNVTQLNLANNQFTGGVPYSISDMTSLTNLNLGHNQFRGQLNDMFTKLSSLSILDLSFNSLSGNLPQSFSSLSNIKTMYLQNNQFTGTIDVLATLPLDNLNVQNNHFTGWIPEQLKSINLQKDGNAWNSGPAPPPPPGTPPATRNNRNHGSGGSNGSPSDADSSDGGKKSGIGGGGIAGIIISILVVGAIVAFFLVKKKSRKSSLDPEKIDNQPLTSSVVHEAKSVQTSSIIDMKTFDTSAAINLKPPPIERHKSFDEDEFSKKPIIAKKTVTAPANVKSYSIADLQIATGSFSMDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLSNERSDDFMEVVSNISQLHDPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEACSPSVVHKNIKSANILLDVELNPHLSDAGLASYIPNADQILNRNAGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGSNRGEDPETQDM 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02141 711 Gene3D Ribonuclease Inhibitor 34 178 IPR032675 -
Bva02g02141 711 MobiDBLite consensus disorder prediction 257 278 - -
Bva02g02141 711 SUPERFAMILY L domain-like 49 229 - -
Bva02g02141 711 MobiDBLite consensus disorder prediction 690 711 - -
Bva02g02141 711 Gene3D Ribonuclease Inhibitor 179 243 IPR032675 -
Bva02g02141 711 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Bva02g02141 711 Gene3D Transferase(Phosphotransferase) domain 1 486 699 - -
Bva02g02141 711 CDD STKc_IRAK 413 682 - -
Bva02g02141 711 PANTHER OS01G0253100 PROTEIN 18 706 IPR045271 GO:0004714|GO:0006468
Bva02g02141 711 ProSiteProfiles Protein kinase domain profile. 407 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02141 711 SUPERFAMILY Protein kinase-like (PK-like) 390 679 IPR011009 -
Bva02g02141 711 PRINTS Leucine-rich repeat signature 95 108 - -
Bva02g02141 711 PRINTS Leucine-rich repeat signature 162 175 - -
Bva02g02141 711 Gene3D Phosphorylase Kinase; domain 1 370 484 - -
Bva02g02141 711 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 706 - -
Bva02g02141 711 MobiDBLite consensus disorder prediction 236 283 - -
Bva02g02141 711 Pfam Protein tyrosine and serine/threonine kinase 409 679 IPR001245 GO:0004672|GO:0006468
Bva02g02141 711 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Bva02g02141 711 SMART LRR_typ_2 138 161 IPR003591 -
Bva02g02141 711 SMART LRR_typ_2 92 120 IPR003591 -
Bva02g02141 711 SMART LRR_typ_2 162 185 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02141 Bva-Chr2 21926734 21933159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02141 1 696 Strubbelig Receptor Gene Family AT1G53730 68.503 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bva02g02141 PK_Tyr_Ser-Thr 7.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02141 - - gmx:100780323 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02141 02 21926734 21933159 Bva02g02141 02 21926734 21933159 ECH