Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02137 ATGTCTTCTTCTCACCCTCCTCTCAATTGGTCTACTTCTGTTGATTGCTGTAATTGGGAAGGCATTGTTTGCCATGCCGGTGATGATAATGGGGATCAGCGGGTCATCCGTCTATTGCTATCCTCTAAAGGTCTCAGTGGCTCCATCTCCTCATCTCTCACAAACCTCACCAGTCTCTCTCAGCTCAATCTTTCCCATAATCAGTTTTCTGGTGCTCTTCCAACCCAATTTTTTTCGCTTCTCAATCATCTGCAGATTCTTGATTTAAGCTACAACCGTCTCTCTGGTGAATTGAGACACTTTGATGCTAATATCAGCAGTAGTAGTGTTGTCCAGGAGATTGATTTGTCTAGTAATATATTCCATGGTATCATCCCATCTCCTGTACTTCAGAATCTAGCGTCCGCAGCAGCAGCAGGGAGTTTGACATCTTTTAATGTTAGTAAAAATAGCTTCACAGGTCAAATtccaatctctttcttttgcattaaTGAGAAAAACTCATCCTCTGTCAGATTCTTGGATTTTTCCTCCAACAACTTCAGTGGTATTATTCCATATGGACTAGGAGCATGTTCGAAGCTTGAGAAATTTCTAGCAGGTTCCAATTCTCTATCTGGGAATATTCCTGATGATGTTTTTGATGCTACTGCCCTCCAAGTTCTCTCCTTGCCCCTTAATAAACTCTCTGGAACCATTGGTAATGCCATAGTTAGCCTTACAAACCTCACTGTTCTGGACCTCTACTCTAACCTTTTGTTTGGTCCCATTCCCCAGGATATTGGTAAGCTCTCCAACTTGGTACAGCTACAGCTTCATATCAACAATTTGACTGGTACTCTTCCACCATTTTTGAGCAACTGTGTCAATCTTGTCATCTTGAATTTAAGAGTCAACCATTTGGTAGGAAATCTCTCAGAATTCAATTTCTCCAGGTTTCTCCGACTTACTACACTTGACCTTGGCAACAATAACTTTACGGGTGATTTGCCACAAACCCTTTATGCATGCGAGTCACTTGTTGCCGTTAGACTAGCATCTAACCAGCTTGAGGGGCAGATCTCGCCTGACATAGTTAACTTGACGTCTCTGtcctttttatcattttctaccAACAACATAAGGAATTTCACTGGCGCTCTGAGGATACTCACTGGGCTGAAGAACCTTAGTACCCTCGCTCTTTCCAAGAATTTTTATGGTGAAATGATTCCAGATGATGTGAACATAATAGGCCCAGGCGACTTCCAAAATCTCCAAATTCTAGCCCTGGGTGGTTGTAATTTTACAGGCCAAATACCAGTCTGGCTTTCAAAGCTTAATAAACTTGAGGTCGTGGACCTGTCCTATAATCAACTCACTGGTCCAATTCCTTCTTGGTTGGGGAAACTACCTCAACTTTTCTACTTGGACTTGTCTGTTAACCACATTACAGGAACATTTCCTACAGAGCTCACAACACTTCCCGCACTTACATCACAAAAGGTGAATGATGAAGTGGAAAGGGCTTACCTGCAATTACCCGTCTTTGTTGCTCCTACCAATGCTTCCATGCAGCAATATAATCAGCCTTCCAACCTTCCACCAGCAATATATCTGGGGAACAACAACATCAGTGGCAGTATACCTATAGAGATTGGCCAACTGAAAGTCCTGAATCATCTATATCTGAATCATAACAACTTCTCTGGCAGCATTCCTGTTCAAATTTCTAATTTGACTAACTTAGAGAGATTAGACCTCTCAGGAAATCGGCTATCTGGTGAAATTCCTGCTTCACTCAAAAGCCTAcatttcttatcttatttcaGTGTGGCAAATAATGATCTTCAAGGGGAAATACCAAATGGAGGTCAATTTGATACTTTCCCCGCAAGCAGCTTTGAAGGAAATCCACAGTTGTGTGGTTTAGTTGTTCAACGCTCTTGTCCAAATAATTCAGGTGGTAGTAGTGCAGCCCACGGGCGCACTCGCTCAAACAAAAAACTAATTCTCGGGCTGGTTCTTGCAATCTTTATTGGCACTGTCTTTATCACGACTCTGTTCGCACTGTGGATACTATCTAAGAGGAGGATCAATCCAGGAAGAGACCCTGATAGCATTGAACTGGAATCAATTTCAGCCAACTCCAACAGTGGCATTCATCCGGAGGTCAATAAGGAGGCTAGCATGGTGGTATTGTTCCCTAATAAAGCAAATGAAACCAAGGATCTTACTATATCTGAAATCTTAAATACCACCGAAAATTTTAGTCAAACGCACATAATAGGCTGTGGTggttttggtttggtttacAAAGCCACATTACCGGATGGAACTAAGGTAGCTATCAAGAAACTTTCTGGAGACATGGGCCTTATGGAAAGGGAATTCAAAGCTGAGGTGGAGGCTTTGTCAACAGCCCAACACGAGAACCTGGTGGCATTGCAAGGTTACTGTGTGCATGATGGTTTTCGGCTTCTCATATATACTTACATGGAAAATGGAAGTCTAGATTACTGGTTACATGAAAAGCCTGATGGTGCATCTCAACTAGATTGGCCAACACGACTGAAGATTGCACAAGGTGCAAGTCGTGGTTTGGATTACATGCACCAAATATGTGAACCACACATTGTACACCGTGATATAAAATCAAGCAATATCCTTCTTGATGAAAAGTTTGAGGCACGTGTAGCTGATTTTGGGTTGTCCAGATTGATTCTTCCTTATCAAACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCAGAATATGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTGTACAGCTTTGGGGTTGTTATGCTTGAGCTGCTCACTGGGAGGAGGCCTGTTGACGTATGCAAGACAAAAATGTCAAGGGAGTTGGTTGGCTGGGTGCAACAGATGAGGAATGAAGGAAAACAAGAGCAAGTCTTTGACCCTATTTTGAGAGGGAGAGGctttgaagaagaaatgctGCAGGTGCTTGATGTGGCTTGCATGTGTGTCAGCCAGAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGATTGGCTGAAGAATGTAGGATCAGCCAAACCACACCAGAATAAAGACTA 3104 0.4149 MSSSHPPLNWSTSVDCCNWEGIVCHAGDDNGDQRVIRLLLSSKGLSGSISSSLTNLTSLSQLNLSHNQFSGALPTQFFSLLNHLQILDLSYNRLSGELRHFDANISSSSVVQEIDLSSNIFHGIIPSPVLQNLASAAAAGSLTSFNVSKNSFTGQIPISFFCINEKNSSSVRFLDFSSNNFSGIIPYGLGACSKLEKFLAGSNSLSGNIPDDVFDATALQVLSLPLNKLSGTIGNAIVSLTNLTVLDLYSNLLFGPIPQDIGKLSNLVQLQLHINNLTGTLPPFLSNCVNLVILNLRVNHLVGNLSEFNFSRFLRLTTLDLGNNNFTGDLPQTLYACESLVAVRLASNQLEGQISPDIVNLTSLSFLSFSTNNIRNFTGALRILTGLKNLSTLALSKNFYGEMIPDDVNIIGPGDFQNLQILALGGCNFTGQIPVWLSKLNKLEVVDLSYNQLTGPIPSWLGKLPQLFYLDLSVNHITGTFPTELTTLPALTSQKVNDEVERAYLQLPVFVAPTNASMQQYNQPSNLPPAIYLGNNNISGSIPIEIGQLKVLNHLYLNHNNFSGSIPVQISNLTNLERLDLSGNRLSGEIPASLKSLHFLSYFSVANNDLQGEIPNGGQFDTFPASSFEGNPQLCGLVVQRSCPNNSGGSSAAHGRTRSNKKLILGLVLAIFIGTVFITTLFALWILSKRRINPGRDPDSIELESISANSNSGIHPEVNKEASMVVLFPNKANETKDLTISEILNTTENFSQTHIIGCGGFGLVYKATLPDGTKVAIKKLSGDMGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASRGLDYMHQICEPHIVHRDIKSSNILLDEKFEARVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKTKMSRELVGWVQQMRNEGKQEQVFDPILRGRGFEEEMLQVLDVACMCVSQNPFKRPSIREVVDWLKNVGSAKPHQNKD 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02137 1034 Gene3D Transferase(Phosphotransferase) domain 1 826 1032 - -
Bva02g02137 1034 Gene3D Ribonuclease Inhibitor 2 101 IPR032675 -
Bva02g02137 1034 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Bva02g02137 1034 PANTHER OS06G0692500 PROTEIN 9 1026 - -
Bva02g02137 1034 SMART LRR_typ_2 549 572 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 440 464 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 313 337 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 264 288 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 573 597 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 56 80 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 240 263 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 361 383 IPR003591 -
Bva02g02137 1034 SMART LRR_typ_2 81 108 IPR003591 -
Bva02g02137 1034 Pfam Leucine Rich Repeat 575 597 IPR001611 GO:0005515
Bva02g02137 1034 SMART serkin_6 750 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02137 1034 Pfam Protein kinase domain 751 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02137 1034 PANTHER LEUCINE RICH REPEAT KINASE 2 9 1026 - -
Bva02g02137 1034 Gene3D Ribonuclease Inhibitor 204 309 IPR032675 -
Bva02g02137 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 872 884 IPR008271 GO:0004672|GO:0006468
Bva02g02137 1034 SMART LRR_sd22_2 361 392 - -
Bva02g02137 1034 SMART LRR_sd22_2 573 599 - -
Bva02g02137 1034 SMART LRR_sd22_2 81 107 - -
Bva02g02137 1034 SMART LRR_sd22_2 240 269 - -
Bva02g02137 1034 SUPERFAMILY L domain-like 521 635 - -
Bva02g02137 1034 PRINTS Leucine-rich repeat signature 84 97 - -
Bva02g02137 1034 PRINTS Leucine-rich repeat signature 573 586 - -
Bva02g02137 1034 Gene3D Ribonuclease Inhibitor 102 203 IPR032675 -
Bva02g02137 1034 Gene3D Phosphorylase Kinase; domain 1 710 825 - -
Bva02g02137 1034 SUPERFAMILY L domain-like 9 223 - -
Bva02g02137 1034 ProSitePatterns Protein kinases ATP-binding region signature. 756 779 IPR017441 GO:0005524
Bva02g02137 1034 ProSiteProfiles Protein kinase domain profile. 750 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02137 1034 Gene3D Ribonuclease Inhibitor 310 650 IPR032675 -
Bva02g02137 1034 SUPERFAMILY L domain-like 165 494 - -
Bva02g02137 1034 Pfam Leucine rich repeat 418 477 IPR001611 GO:0005515
Bva02g02137 1034 Pfam Leucine Rich repeat 82 97 IPR001611 GO:0005515
Bva02g02137 1034 SUPERFAMILY Protein kinase-like (PK-like) 736 1021 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02137 Bva-Chr2 21898940 21902606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02137 1 683 Miscellaneous Gene Families AT1G17250 52.305 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva02g02137 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02137 - - gmx:100807989 1467.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02137 02 21898940 21902606 Bva02g02137 02 21898940 21902606 ECH