Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02131 ATGGACAGCCCAGGAGAAATACTGGAAAATATGCCTTTGGGATTCAGATTCCGACCCACAGATGAAGAGCTTGTCAATCACTATCTCAAGCTCAAGGTGTTGGGTGATAATTCACGTGTAAGGATTATTCGTGAGGTTGACATTTGCAAGTTTGAGCCTTGGGACTTACCAGcTCTTTCGGAGGTGAAATCGGATGACCCAGAATGGTTTTTCTTCAGTCCTCGTGATTTGAAGTATTCAAACAGTAATCGGGCTAACAGGACAACCAAAGCTGGGTTCTGGAAAGCCACTGGGAAAGACCGTAATGTGAAAATCAGAGGTACCAACAATGTCATTGGTACGAAGAAGACTCTGGTTTTCTACAAAGGTCGTGTTCCTCATGGCGTCAAGACCAACTGGATTATACATGAATACCACGCAACTATCTTTCCTGTTGACCAGAGGACCTATGTTTTATGTCGCTTAATGAACAAACATGAGAAAAAAACAGATGAGGGACCAAGTAGCCATATGGCTTCTGACTATGAAAATCAAGCCATAGCAGATCAATTTCCAGAGgtGAATAGTTTGGAAGAAGTGAATCTGGAATCAATCTTTCCGGAACCAGCTCAGGCAGAGGTGTATCCCTTTGACTCTCTACAGCAGTCTCCAGTTGTCTCTGAGCAAGAACGaactttccctttttatcttCCGGACACTACCGAAGAGGAAGACAATGCATTCTTGAATGCAATTATAGCTGATGAAGATGTTTTTTACACCGAACAAAGGAGTCACGCTTTTGTCACTGACTACACCCCTTCAAAGCCATTGAGAAAGGTGTACTATGAAAGCAGTGATACAGAAGCTGAAGTAATATCTGCACGGTCCAGCAAAATGGTTAAATCATCGCATTATGGCACTGTACATGCTGGCTCTCAACTCATTTCTAACCAACAAGTGAACTCAATGCAAAAGGACATTATGCAGGATGACTTCTGGGGAGTGGGCACTTCCTCTGCTGACTCCACTAAAGATGGACATTTGTCTATCAACTGTATTTCAATTGTTAGCTCTCCTTCCCCTCCAAGGAGACACAAACCTCAGGATCATCCAAAATCATCACAGAAAGCTTCTGCAAGAAGGCAAACACAGAGAAAGGTTTCAAGCAAAGAAATGTCCAAAAATGAGGCTGAAAAGGAAATATCCATTcttcaaacaaagaaagatcagGGGAAAACTCAGGGTTCCAATTTTAGAAAGAAGTCGGAAACCACAAGCATCCAATCATCTGAGGTTGACAGAAAAGGGTCTTTCATCTACTGGGAGACGCAATCAAGCCTGAACCTAAATCCACATTCAGTATATCTTGTCAACGTAGTTGTTGGGTTTTGTTTGCTCATAGTCACTGTTTGGGATCTGATATCATCTAGGAACTG 1418 0.414 MDSPGEILENMPLGFRFRPTDEELVNHYLKLKVLGDNSRVRIIREVDICKFEPWDLPALSEVKSDDPEWFFFSPRDLKYSNSNRANRTTKAGFWKATGKDRNVKIRGTNNVIGTKKTLVFYKGRVPHGVKTNWIIHEYHATIFPVDQRTYVLCRLMNKHEKKTDEGPSSHMASDYENQAIADQFPEVNSLEEVNLESIFPEPAQAEVYPFDSLQQSPVVSEQERTFPFYLPDTTEEEDNAFLNAIIADEDVFYTEQRSHAFVTDYTPSKPLRKVYYESSDTEAEVISARSSKMVKSSHYGTVHAGSQLISNQQVNSMQKDIMQDDFWGVGTSSADSTKDGHLSINCISIVSSPSPPRRHKPQDHPKSSQKASARRQTQRKVSSKEMSKNEAEKEISILQTKKDQGKTQGSNFRKKSETTSIQSSEVDRKGSFIYWETQSSLNLNPHSVYLVNVVVGFCLLIVTVWDLISSRN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02131 472 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 8 418 - -
Bva02g02131 472 MobiDBLite consensus disorder prediction 347 422 - -
Bva02g02131 472 MobiDBLite consensus disorder prediction 378 400 - -
Bva02g02131 472 SUPERFAMILY NAC domain 9 158 IPR036093 GO:0003677|GO:0006355
Bva02g02131 472 MobiDBLite consensus disorder prediction 401 422 - -
Bva02g02131 472 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Bva02g02131 472 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Bva02g02131 472 Coils Coil 374 408 - -
Bva02g02131 472 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Bva02g02131 472 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02131 Bva-Chr2 21871444 21874575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02131 8 164 NAC Transcription Factor Family AT4G35580 60.494 3.12e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva02g02131 NAM 5.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02131 - - gsj:114390609 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02131 02 21871444 21874575 Bva02g02131 02 21871444 21874575 ECH