Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02129 ATGGAGCTGATGCAAGAAGCTGTGAAAGGATATTCTgatagagaagaagaagaggaagaggaattAGATCAAATTAGAAGGTTACACCAGCAAGATGCAGCAGCTACCAATATCAATTTCAACCACAGAAAGCTAGAAGACTTCATGGAGTTATCTCTTGCGAACAACAAAGATATCGATGATGCTAATTTCCACGGCGGAGCTAGCAGTAGCGGTGGCACAAATAATAacgataataataataataataatgacaatATTCCTATTGAGAAGGAGCACATGTTTGATAAAGTGGTGACGCCAAGTGATGTTGGCAAACTCAACCGGCTAGTGATACCAAAACAGCATGCCGAGAAGTATTTCCCCCTCGACTCCTCCACCAACGAGAAAGGCCTTCTCCTCAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCTTATTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGTTGGAGCCGGTTCGTCAAGGAGAAAAAGCTCTATGCCGGTGACATTGTGTCGTTCCAGCGCGGTGTTGGCGAATTGTACAGACACAGGTTGTACATAGACTGGCGGCACCGGCCTAATCACGGCCCCGACCACGCGGCCACGCTGATTAcacctttctttcttcacaATCAGCAGCATTTACCGCAGTATTCCATTAGGTGGGGTGGCAGATTTTACTCACTGCCAGCGCAAGCGCCTGGGTCTATTCCCTGGCACCAGCATGAGTATCTACAACTCCAGCAGTTGAATTACAACAACATGTATCCATTTCATCAGCAAAACCATCGTCCCCAGCAATACCATGGTGGTGGGGGAAGCCATAGCTATAATGAGCTCAATTCCGGATCTGGGtcaatgtattataattatttacgGTCAACAACACCAGCACCATCAGTGGCTGATTATCAGGGACAGCAAGTGGTTGGTGGCAATGCTCCAATGATCATTGACTCGGTGCCAGtttctcatcatcatcatcatcaacatcaacatGGTAAGAGTACTAGCAGCACTGCTACTACGGGGAAACGACTTAGACTATTTGGGGTGAACATGGAATGTGCATCACCAGCTGAAGATCCCAAATGCTgtttattatcatcatcatcggTGGCGCATGTGGCAATGACCAATTCACTTCCCTCTTCTTCTATTCCACCTCTTCACTTGAGGGTGGCCCAAGAAGACCACTCACTTGGATCATCATCAGCAAGGTTTGATCAGCTGGAGAGAGGTCAAAGTTCAATGCTTTTCGATTTGGATCCCTCCTTGCAATACCGGCAATG 1313 0.4318 MELMQEAVKGYSDREEEEEEELDQIRRLHQQDAAATNINFNHRKLEDFMELSLANNKDIDDANFHGGASSSGGTNNNDNNNNNNDNIPIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLYAGDIVSFQRGVGELYRHRLYIDWRHRPNHGPDHAATLITPFFLHNQQHLPQYSIRWGGRFYSLPAQAPGSIPWHQHEYLQLQQLNYNNMYPFHQQNHRPQQYHGGGGSHSYNELNSGSGSMYYNYLRSTTPAPSVADYQGQQVVGGNAPMIIDSVPVSHHHHHQHQHGKSTSSTATTGKRLRLFGVNMECASPAEDPKCCLLSSSSVAHVAMTNSLPSSSIPPLHLRVAQEDHSLGSSSARFDQLERGQSSMLFDLDPSLQYRQ 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02129 437 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 63 402 IPR044800 GO:0003700
Bva02g02129 437 MobiDBLite consensus disorder prediction 64 88 - -
Bva02g02129 437 MobiDBLite consensus disorder prediction 67 88 - -
Bva02g02129 437 MobiDBLite consensus disorder prediction 331 350 - -
Bva02g02129 437 CDD B3_DNA 93 182 IPR003340 GO:0003677
Bva02g02129 437 SMART B3_2 95 200 IPR003340 GO:0003677
Bva02g02129 437 SUPERFAMILY DNA-binding pseudobarrel domain 92 183 IPR015300 -
Bva02g02129 437 Pfam B3 DNA binding domain 95 197 IPR003340 GO:0003677
Bva02g02129 437 Coils Coil 1 28 - -
Bva02g02129 437 Gene3D - 89 208 IPR015300 -
Bva02g02129 437 MobiDBLite consensus disorder prediction 1 22 - -
Bva02g02129 437 ProSiteProfiles B3 DNA-binding domain profile. 95 195 IPR003340 GO:0003677
Bva02g02129 437 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 63 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02129 Bva-Chr2 21857447 21858932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02129 90 430 RAV Transcription Factor Family AT2G46870 47.143 2.77e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva02g02129 B3 2.9e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02129 - - lja:Lj3g3v2520080.1 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02129 02 21857447 21858932 Bva02g02129 02 21857447 21858932 ECH