Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02124 ATGGACGCACACTCCTCTGGAGAAGAAGTGGTTGTTAAGACTAGAAAACCTTATACAATCACTAAGCAAAGGGAACGATGGACAGAGGAGGAGCATAATAGGTTCCTAGAAGCTTTAAAGCTCTACGGGCGGGCATGGCAGCGTATAGAAGAGCATATTGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCCCTAGTAAAAGGTCTTCCAATAGGTCAAGCTCTCGACATAGACATTCCACCGCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGATCAATGTTGGTACTCCTATATCTAATAATGGAGGAAAAGATGGAAAACTTACGTCAGTTTCATCTTCACAGAGTAAACAAACACTGGACTTGGAGAAAGAACCTCTTCCAGAGAAAACCAATGGAGATGAAGGGCcaactataaaagaaaataagggtGATAGCTGCTCAAAAGTATTTACCATTCTCCAGGAGGTACCGTGTTCGACTGTTTCTTCAGCAAACAAAAGTTCATTGTCTATTTCAGTACCACAGAGAAATTCATACACCTTAAGAGAGTTCATACCGTCAGTCAAAGAGGTAATAGCCTGCGATGAAACCAATGAGTCCATTGTTActattgaattaaaagaaCACCAGAAGTTGGAGAAAGATGATGGCAAACACACAGAACAGAACAATGGCACAAGTAAAGCCTCTATGTCGGAGAACTCTGATGCGTCACATGTGAAATTGGTTCAGCATGAGAAAACAGATGATCTCAATTGTGCATTGACAAAAGATGGGATGCAAGGCAATCAGAACTACCCTAGACACGTCCCTGTACATGTTCTTGATGGGAACCTTGGAACCAATACTCAAACTCCAACCCAAGATATGTTGTTCCGAGACTCCATATTTCACCCAATGGGAGGGGTTAATGGACAACCTAATGTTCTCACAAATTCAGCTGCATCAAACACAAGTGAAAGTCAAAGTAACACAGCAAGATCTTCTATTCATCAATCATTTCCTGCTTATCCTCCCTTCACACCAGTTCGCCATAATCAAGACAATTACCAATCATTTCTTCATGCCTCCTCCACATTTTCAAGTCATATTGTCTCTACTCTTATGCAAAATcctgctgcccatgctgctgCAAGTTTTTCTGCTACATTTTGGCCCTATGCAAATGCTGAAACTTCTGCAGATTCTCCTGCATGCTCTCAAGGGGGTTTCCCATCTAGGCAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCATGGTGGGCAGCCCATGGACTGCTTCCTTTATGTGCTCCACTTCATACTGCATTTACATGTCCTCCTGCAACAGCAACAGCAGCCCGACCAATGGACACTGGAGAGGCACAAGCAGCCAAGACAGATAAAGGAGAGAGTATTCTTCAAAATCCTCCTACGCAGGATCAGGTACTGGATCCAGAATTCTCAGAAGCTCTACAAGCTCAAAATTCAGCTTCTAAGTCACCAGCTGCTTCTTCATCAGATTATGAGGAACATGGAGATGTCAAGTTAGATACTTCATCAAAGGCCACTGACCATGAGAGTAACAAAGTAGTTTCTGAGCACCTTGATTCCAATAAAACAAAGGGTAGAAAACAGGTAGACCGTTCCTCTTGTGGCTCCAACACAGCCTCTAGCAGCGATGCAGAGACAGATGCATtagagaaggaagagaaagagaaagaagagccCAAAGCACCTGATCCTAGCCATTTAGCTGCTGAGTTTAGCAATCGACGTTGTAGAAGCATTGGCAGCATTACTGATTCTTGGAAGGAGGTTTCCGAAGAGGGGCGATTGGCCTTTCAGGCTCTATTCACCAGAGAGGTGTTGCCACAGAGCTTTTCACCTCCACATGACTTGACAAATATGGAAAATCAGGAGAATATTGAGGGTAACAAGCAAAATACAGATGACAAGGATGAAGACCTCAAGAGCAAGAAATGCAGTTCTGGTTGTAAAGGAATTCCAAATAACCTGTCTCTTGCAGAAAACAACAATGAGGAGGAGGGACTGCTAAGCATTGGGCTTGGACAAGGAAAGCTTAAAGTTCGTCGAACAGGGTTTAAACCTTATAAAAGATGCCCAATAGAAGCCAGGGAAAACAGGATGGCAATCGGCAGCAACCAGGGTGAAGAGAAAGTTGCCAAGAGGATACGCTTGGAAGGGGAGGCTTTAACTTG 2279 0.423 MDAHSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGLPIGQALDIDIPPPRPKRKPSNPYPRKINVGTPISNNGGKDGKLTSVSSSQSKQTLDLEKEPLPEKTNGDEGPTIKENKGDSCSKVFTILQEVPCSTVSSANKSSLSISVPQRNSYTLREFIPSVKEVIACDETNESIVTIELKEHQKLEKDDGKHTEQNNGTSKASMSENSDASHVKLVQHEKTDDLNCALTKDGMQGNQNYPRHVPVHVLDGNLGTNTQTPTQDMLFRDSIFHPMGGVNGQPNVLTNSAASNTSESQSNTARSSIHQSFPAYPPFTPVRHNQDNYQSFLHASSTFSSHIVSTLMQNPAAHAAASFSATFWPYANAETSADSPACSQGGFPSRQIGSPPSMAAIAAATVAAATAWWAAHGLLPLCAPLHTAFTCPPATATAARPMDTGEAQAAKTDKGESILQNPPTQDQVLDPEFSEALQAQNSASKSPAASSSDYEEHGDVKLDTSSKATDHESNKVVSEHLDSNKTKGRKQVDRSSCGSNTASSSDAETDALEKEEKEKEEPKAPDPSHLAAEFSNRRCRSIGSITDSWKEVSEEGRLAFQALFTREVLPQSFSPPHDLTNMENQENIEGNKQNTDDKDEDLKSKKCSSGCKGIPNNLSLAENNNEEEGLLSIGLGQGKLKVRRTGFKPYKRCPIEARENRMAIGSNQGEEKVAKRIRLEGEALT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02124 759 MobiDBLite consensus disorder prediction 325 358 - -
Bva02g02124 759 SMART sant 23 71 IPR001005 -
Bva02g02124 759 MobiDBLite consensus disorder prediction 138 158 - -
Bva02g02124 759 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Bva02g02124 759 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Bva02g02124 759 MobiDBLite consensus disorder prediction 645 681 - -
Bva02g02124 759 PANTHER PROTEIN LHY 2 741 - -
Bva02g02124 759 Gene3D - 26 73 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 582 601 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 240 254 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 488 502 - -
Bva02g02124 759 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Bva02g02124 759 MobiDBLite consensus disorder prediction 648 663 - -
Bva02g02124 759 CDD SANT 26 69 IPR001005 -
Bva02g02124 759 MobiDBLite consensus disorder prediction 508 525 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 86 160 - -
Bva02g02124 759 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Bva02g02124 759 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Bva02g02124 759 MobiDBLite consensus disorder prediction 229 254 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 108 137 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 325 352 - -
Bva02g02124 759 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Bva02g02124 759 MobiDBLite consensus disorder prediction 475 609 - -
Bva02g02124 759 PANTHER SWI/SNF COMPLEX-RELATED 2 741 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 664 681 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 526 566 - -
Bva02g02124 759 MobiDBLite consensus disorder prediction 567 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02124 Bva-Chr2 21811528 21818766 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva02g02124 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02124 K12133 - gmx:100271888 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02124 02 21811528 21818766 Bva02g02124 02 21811528 21818766 ECH