Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02122 ATGGCCAATATTTCAGCTGAAACCCACACTCAACTTGTTGATGctgaaaacaaagaacaagTTAACCAACAATcagaagaaatagaagatgaagaaagctTCTCCTATGCTATGCAGCTGGAATTATCCACTGTGCTTTCATTTGCCATGCAATCTGCAACTCAGCTTGGAATTTTTGACATCATAAAGAAAGCTGGTCCTGGTGCCAAGCTTTCAGGGAAAGACATTGCAACCCAACTTTGCTGCAAGAATCCAGAAGCACCAAGCATGCTGGATAGAATTCTCAGGCTTCTGGCATCCCACTCTGTTCTCCACTGTTCTGTGGTGGCCGATGATCAAAAGCCTGGTTCTTTTCAGAGGCTCTACAGCCTAGCTCCTGTGGCCAGATTCTACTCTCGCAATGCTGAAGGTGTTTCAATGGGGCCCTTCATAGCATTGGTTCAAGATAAGGTTTCCCTCGAGAGCTGGTCGCAACTGAAAGATGCAATTCAAGAAGGCGGTATTCCATTTAATAGGGTTCATGGCACACATGTCTTTGAGTATCCCAGCTTGGACTCAAGGTTCAATCAGGTTTTCAACACTGCAATGACCAACCAAAGCACTTTACTTGTTGAGAAGATTCTTGAAACCTACAAAGGATTTGAAGAGATTAAGACATTAGTGGATGTTGGAGGGGGCCTTGGGAACaatcttaatttgattatttccaAATATCCTCACATTCAtgctattaattttgaattgtcTCATGTTATAGACCATGCTCCTCCTTATTCTGgtgTGAAACACGTGGGAGGAGACATGTTTGAAAGCATACCTAAAGGAGATGCTATCTTTATGAAGTGGATACTTCATGATTGGAGCGATGAAATGTGCTTGAAACTATTGAAGAATTGCTATAATGCTATTCCTCCATATGGAAAGGTGATTGTTGTGGAGGGAGTTGTTTCTATTATACCCGAAACTAATGCTGCTGCAAAAAGCATCTCTCAAAGTGATGTTCTTATGATGACTCAAAGCCCAGGTGGAAAAGAGCGAACTGAACAAGAATTCATGGAATTGGCAACATCAGCTGGATTTAACGGCATTAGATATGCATGCTTTGTTGGTAATAATTGGGTTATGGAAATCTTCAAGta 1139 0.3907 MANISAETHTQLVDAENKEQVNQQSEEIEDEESFSYAMQLELSTVLSFAMQSATQLGIFDIIKKAGPGAKLSGKDIATQLCCKNPEAPSMLDRILRLLASHSVLHCSVVADDQKPGSFQRLYSLAPVARFYSRNAEGVSMGPFIALVQDKVSLESWSQLKDAIQEGGIPFNRVHGTHVFEYPSLDSRFNQVFNTAMTNQSTLLVEKILETYKGFEEIKTLVDVGGGLGNNLNLIISKYPHIHAINFELSHVIDHAPPYSGVKHVGGDMFESIPKGDAIFMKWILHDWSDEMCLKLLKNCYNAIPPYGKVIVVEGVVSIIPETNAAAKSISQSDVLMMTQSPGGKERTEQEFMELATSAGFNGIRYACFVGNNWVMEIFK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02122 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 376 IPR029063 -
Bva02g02122 379 Gene3D - 13 131 IPR036388 -
Bva02g02122 379 Pfam Dimerisation domain 50 99 IPR012967 GO:0046983
Bva02g02122 379 Pfam O-methyltransferase domain 156 361 IPR001077 GO:0008171
Bva02g02122 379 Gene3D Vaccinia Virus protein VP39 132 379 IPR029063 -
Bva02g02122 379 PANTHER O-METHYLTRANSFERASE 18 379 IPR016461 GO:0008168
Bva02g02122 379 SUPERFAMILY "Winged helix" DNA-binding domain 29 134 IPR036390 -
Bva02g02122 379 PIRSF O-mtase 13 379 IPR016461 GO:0008168
Bva02g02122 379 MobiDBLite consensus disorder prediction 1 19 - -
Bva02g02122 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 379 IPR016461 GO:0008168
Bva02g02122 379 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 18 379 - -
Bva02g02122 379 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02122 Bva-Chr2 21802145 21804309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02122 27 379 Monolignol Biosynthesis Gene Families AT5G54160 50.282 2.08e-130 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02122 K13066 - gmx:100803633 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02122 02 21802145 21804309 Bva02g02122 02 21802145 21804309 ECH