Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02120 ATGTTCATCATTTGCGAATGGTCAATGCAGAAGCCAGAGGAGAAGATACAAGTTGTAATCAAACTATTTAGGAAGGATGAGATGAGACTTTTTCTGTTCTTCGGAGAGCAGTTGGAAGTGAACTGTTTTGAGCAAGGTTTCATTGATGCAGAGAGCTTCGGGCTGGAGGAAGATGAACTATTTTTTATGCCAAACTTAGATGATAAAATGCCATTTCTTCAGATGCTTCAGAGTGTGGAATCCCCCCAGCTTTTTCCCTTCAAAGAGACAAACTTTCAAACACTTCTAAAGCTTCAGCAAACGAAGAAGCCATGGGGAGAAAAATCCTATTTGCCCAGAATGGATactcaaattcaaactttagAGCTTGAAAGCTGCGTCACCCATGACATGGTGGAGATGCAATCACCATTAAAATCAGAAAGCAACGACTTTCAAAACCCACATTCAGCTTCATGCTTTGAAGTATTGGGTTCTGAGTGCAATAAAGAAGGGCCAAAATCAGCCAAAAATTGTACTATAGAGGCTAATATAGTCTCTCCTGCAACTTGGACTAACCCAGAATCATGGTTGAAGGAAAAAACCCAGTGCCCCAAACCTCAGCTGGTTGGGCgtgaaaggagaaagagaaagagaacgaGACCAGCCAAGAGCAAAGTAGACGTTGAAAACCAGCGCATGACTCACATTGCCGTGGAACGCAACCGGCGACGCCAAATGAACGACCATCTCACTGTTTTAAGGTCCCTCATGCCCCCTTCCTATGTTCAAAGGGGTGACCAAGCATCTATTATTGGAGGTGCAATAGACTTTGTAAAGGAATTAGAACAACTTCTTCAATCCCTTGAGTCACAAAAAAGAGTGAGAAAGAACGAAGAGATTGGTTGTTCTAGTGGGTTGTTCAAGCCATCTACACCTGATAATGGAACGAGGTCGACCATGGAAGAAGGAAACCGTGGGGATGAGGTGAAGGCAGAGAACAAGTCAGAAACAGCTGACATAGAGGTGACCGTGATTCAAAACCACGTGAACATGAAAATACAGTGCCAAAGGAGACCTGGGCAATTGCTAAAAGCCATCGTTGCTTTAGAGGATCTTAGGCTAACCATTTTGCATCTCAACATTACCTCCGCACAGGGTTCAGTACTCTATTCTTTCAATCTCAAGATTGAAGAAGATTGCAAGCTAGGGTCAGCAACTGAGATTGCAGAAGCAgttcatcaaatttttaactttatcaatGGTAACTG 1250 0.4112 MFIICEWSMQKPEEKIQVVIKLFRKDEMRLFLFFGEQLEVNCFEQGFIDAESFGLEEDELFFMPNLDDKMPFLQMLQSVESPQLFPFKETNFQTLLKLQQTKKPWGEKSYLPRMDTQIQTLELESCVTHDMVEMQSPLKSESNDFQNPHSASCFEVLGSECNKEGPKSAKNCTIEANIVSPATWTNPESWLKEKTQCPKPQLVGRERRKRKRTRPAKSKVDVENQRMTHIAVERNRRRQMNDHLTVLRSLMPPSYVQRGDQASIIGGAIDFVKELEQLLQSLESQKRVRKNEEIGCSSGLFKPSTPDNGTRSTMEEGNRGDEVKAENKSETADIEVTVIQNHVNMKIQCQRRPGQLLKAIVALEDLRLTILHLNITSAQGSVLYSFNLKIEEDCKLGSATEIAEAVHQIFNFINGN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02120 416 MobiDBLite consensus disorder prediction 314 328 - -
Bva02g02120 416 Coils Coil 272 292 - -
Bva02g02120 416 Gene3D - 215 292 IPR036638 GO:0046983
Bva02g02120 416 MobiDBLite consensus disorder prediction 202 222 - -
Bva02g02120 416 PANTHER TRANSCRIPTION FACTOR BHLH70 42 415 - -
Bva02g02120 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 275 IPR011598 GO:0046983
Bva02g02120 416 PANTHER MAX DIMERIZATION, MAD 42 415 - -
Bva02g02120 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 224 292 IPR036638 GO:0046983
Bva02g02120 416 CDD bHLH_AtFAMA_like 227 298 - -
Bva02g02120 416 Pfam Helix-loop-helix DNA-binding domain 225 276 IPR011598 GO:0046983
Bva02g02120 416 SMART finulus 230 281 IPR011598 GO:0046983
Bva02g02120 416 MobiDBLite consensus disorder prediction 296 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02120 Bva-Chr2 21791938 21795163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02120 52 415 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 43.081 3.18e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva02g02120 HLH 4.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02120 - - gmx:100789928 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02120 02 21791938 21795163 Bva02g02120 02 21791938 21795163 ECH