Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02119 ATGGAAGCACAAAGCTCTCAGCACCCACAAGTTATTGAAATCAGCGGAGATATTGAAGATGATGGAAGATGGACTTATAAGGGAAACAAGATTTGTGGGGAAGCACCATGTGGGTTTTCAGATGCTGGATCCACCTCTAAGGATTCCAAAGAGAGATCAAAGTCAATCCGGAAGCTTTTGATTGCTGTGTTTCTGTGTGCTATTTTCATGAGCGTTGAAGTGGTTGGTGGCATCAAAGCTAATAGTCTTGCAATATTGACTGATGCGGCTCATTTGCTTTCAGATGTTGCAGCCTTTGCAATCTCCTTGTTCTCTATATGGGCTTCTGGATGGGAAGCCACTCCTCGTCAGTCATATGGGTTTTTTAGAATAGAAATTCTTGGTGCTTTGGTTTCTATTCAACTAATATGGTTGCTTGCAGGGATTCTGGTTTATGAAGCCATTGAAAGAATCATCAATGGCAGCAAAGAGGTGAATGGCTTTCTAATGTTTTTAGTTGCTGCATTTGGTCTAGTGGTTAATATCATCATGGCTGTATTATTGGGCCATGGTCATGAAGAACATGATCATGGGTTcacccaccaccaccaccatcatCATCAGCATCACAAGGATCATCAAAAAGATGAGCACCATCATTCTCATGAAGATGATCATGAGCATCATCatagtgatgatgatgatgagaaaCATCAACACGATGAAGAAAATGTTGCTTCACCACTTCTTGGTGAATCAAAAGGGAAaccagaaaagaagaagaaacggAACATAAACATACAAGGGGCTTATCTGCATGTGCTTGGGGACTCTGTCCAAAGCATTGGGGTAATGATTGGGGGAGCAATCATATGGTACAAGCCTGAGTGGAAAATAGTTGATTTGATCTGCACTCTAATCTTTTCAGTAATTGTTTTGGGAACAACTGTGAATCTGCTGAGAAACATATTGGAAGTTCTAATGGAGAGCACGCCACGTGAAATAGATGTGACTGAGCTCGAAAGGGGGCTGCTGGACATGGAAGAAGTGGAAGCTGTTCATGAGCTGCACGTATGGGCCATTACAATGGGGAAGGTTCTGCTGGCTTGTCATGTTAAAATAAGGCCTCAAGCCAATGCAGACATGGTGCTGGACAATGTTATAAACTATATCAGAAGGGTTTATAACATCACACATGTAACTATACAGATAGAGCGCTA 1199 0.3953 MEAQSSQHPQVIEISGDIEDDGRWTYKGNKICGEAPCGFSDAGSTSKDSKERSKSIRKLLIAVFLCAIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERIINGSKEVNGFLMFLVAAFGLVVNIIMAVLLGHGHEEHDHGFTHHHHHHHQHHKDHQKDEHHHSHEDDHEHHHSDDDDEKHQHDEENVASPLLGESKGKPEKKKKRNINIQGAYLHVLGDSVQSIGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLGTTVNLLRNILEVLMESTPREIDVTELERGLLDMEEVEAVHELHVWAITMGKVLLACHVKIRPQANADMVLDNVINYIRRVYNITHVTIQIER 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02119 399 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 399 - -
Bva02g02119 399 SUPERFAMILY Cation efflux protein transmembrane domain-like 53 322 IPR027469 -
Bva02g02119 399 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 326 398 IPR036837 -
Bva02g02119 399 TIGRFAM CDF: cation diffusion facilitator family transporter 57 399 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bva02g02119 399 Pfam Cation efflux family 59 321 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bva02g02119 399 PANTHER METAL TOLERANCE PROTEIN A1 1 399 - -
Bva02g02119 399 MobiDBLite consensus disorder prediction 189 255 - -
Bva02g02119 399 MobiDBLite consensus disorder prediction 192 208 - -
Bva02g02119 399 MobiDBLite consensus disorder prediction 209 255 - -
Bva02g02119 399 Gene3D Cation efflux protein transmembrane domain 55 320 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02119 Bva-Chr2 21786335 21788883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02119 1 399 Inorganic Solute Cotransporters AT2G46800 70.075 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02119 K14689 - gmx:100794876 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02119 02 21786335 21788883 Bva02g02119 02 21786335 21788883 ECH