Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02118 ATGGAAGCACAAAGTTCTCAGCATGCACAAATCATTGAAATCAGAGGAGATTTGCCTGATGGACGAAGGAATCCTAAAGTTTGTGGAGAAGCACCATGTGGATTTGCAGATGCTGGATCCGTTTCTAAGGACGCCAAAGAACGATCAACTTCTATGCGAAAGCTTATCATTGCGGTGGTTCTTTGTGTTATTTTCATGAGTGTTGAAGTTGTTGGAGGGATCAAAGCTAATAGTCTTGCAATATTGACTGATGCCGCACACTTGCTGTCAGATGTTGCAGCCTTTGCCATCTCCTTGTTCTCTTTATGGGCCTCTGGATGGGAAGCCAATCCACGTCAGTCATATGGATTTTTCAGAATAGAGATTCTTGGAGCTTTGGTTTCTATCCAGCTAATATGGCTGCTTGCTGGGATTTTGGTGTACGAAGCCATTGAAAGACTCTTGAATGGTACAAGTACGGTGAACGGCTCTTTAATGTTTATAGTTTCTGCATTTGGTCTGGTGGTTAATATCATTATGGCTCTGTTACTGGGTCATGATCATGGCCATGGGCATGATGGACATGGACATGGTCATGGCCATAACCATAGCCATAGCCATGGAATAACGGTGTCTACCCATGATCATGAACATAATTATGATGTGAAGCATCGAGTAGGTGGGCAGCATCATACTCATGAAGATCATATGCACCATCATGATCATCACGAAGAGCATCCAGAGGATGAGCACCATCATTCTCATGAAGACCACATACATCATCATTCTCATGGTGATGTTACTGAACCGTTTCTTGATGGATCCAAAAGCactaaaaagaagaggaatatAAATGTTCAGGGGGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGGGTCATGATAGGCGGAGCAATCATATGGTATAAGCCTGAGTGGAtgataattgatttaatttgcaCCCTTATCTTTTCGGTAATAGTTTTGGGGACAACCATCAATATGCTAAGAAGCATACTGGAAGTCCTAATGGAGAGCACACCTCGTGAGATAGATGCAACTAAGCTTGAAAGGGGACTATTGGACATGGATGAAGTAGTGGCTGTTCATGAGCTGCATATCTGGGCCATTACAGTGGGAAAGGTTTTGCTGGCTTGCCATGTTAAAATCCAACCTGAAGCAAATGCTGACATGGTGCTGGACAAGGTTGTAGACTATATCAGAAGAGTTTATAACATCAGTCACGTGACTATACAGATAGAGCGCTA 1256 0.422 MEAQSSQHAQIIEIRGDLPDGRRNPKVCGEAPCGFADAGSVSKDAKERSTSMRKLIIAVVLCVIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERLLNGTSTVNGSLMFIVSAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHNHSHSHGITVSTHDHEHNYDVKHRVGGQHHTHEDHMHHHDHHEEHPEDEHHHSHEDHIHHHSHGDVTEPFLDGSKSTKKKRNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWMIIDLICTLIFSVIVLGTTINMLRSILEVLMESTPREIDATKLERGLLDMDEVVAVHELHIWAITVGKVLLACHVKIQPEANADMVLDKVVDYIRRVYNISHVTIQIER 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02118 418 Pfam Cation efflux family 55 340 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bva02g02118 418 SUPERFAMILY Cation efflux protein transmembrane domain-like 49 341 IPR027469 -
Bva02g02118 418 MobiDBLite consensus disorder prediction 185 207 - -
Bva02g02118 418 Gene3D Cation efflux protein transmembrane domain 51 339 IPR027469 -
Bva02g02118 418 TIGRFAM CDF: cation diffusion facilitator family transporter 52 418 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bva02g02118 418 MobiDBLite consensus disorder prediction 221 271 - -
Bva02g02118 418 PANTHER METAL TOLERANCE PROTEIN A1 1 418 - -
Bva02g02118 418 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 346 417 IPR036837 -
Bva02g02118 418 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02118 Bva-Chr2 21782211 21785347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02118 1 177 Inorganic Solute Cotransporters AT2G46800 75.000 1.26e-86 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02118 K14689 - gmx:100794876 583.563