Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02106 ATGCCAGAAAGTATGAGTATATCCGTGAATGGACAATCTCAAGTTCCTCCTGGTTTTCGGTTTCATCCGACGGAAGAGGAGCTGCTGCAATACTACTTGAGGAAGAAGGTCTCTTATGAGAAGATTGACCTTGATGTTATTCGAGATGTTGATCTTAATAAGCTCGAGCCTTGGGATATACAAGAGAAGTGCAAAATTGGAACCACCCCTCAACAAGACTGGTATTTCTTCAGTCACAAAGACAAGAAGTATCCCACCGGAACGCGTACCAACCGCGCCACAGCTGCCGGATTTTGGAAGGCCACCGGCCGTGACAAGGTGATATATAGCAATGGAAAGAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGCCGAGCACCACACGGCCAAAAGTCTGATTGGATCATGCATGAATATAGACTCGATGACAACACCACCGACTCCACCATTgtGCCAAATGTTATGGGAGATGGATCCCAGGAAGAAGGATGGGTGGTATGCAGAATATTCAAGAAGAAGAACCACCACAAAACCCTAGACAGCCCTCTAGCTTCTTCAGCCACAGCCCACATGTTTGATTCCTCCGACGAGGGAGCTTTGGAGCAGATACTTCGGCAAATGGGTCGAAGTtgcaaggaagaaaatgacgGCGGCAACAACAATGGAGGATTTGCTAAACCAAGAGTTTTTGACTCAGTTGCCATCAACAGCAACAATGACTACCAGCTTGACAGGTTCATGAAGCTTCCAAGCTTAGAGAGTCCAAAATCGACAAGCTTAGAGAATGGAGGAGGATACCAGGCTATTATTCCAGATATGGTTGCCGTCACAGACAATGAAGGCTCATTCTCAACGCACCAGGTGAATGGTGGCGACCCCATggttcatcatcatcatcaaatgGAGTCATCATCGTCAAACGGCCTAAACAACTGGGCAGCGCTGGATCGGCTGGTAGCTTCCCAGCTGAATGGCCAAACAGAGGCTTCTAGGCAATTAGCTTGCTTCAATGACCCCACTTTGGGTTATTGCATCAGTGCTGACCATGATCTGCAGCCAATGCCGACCCTACGatcatcatcattttcatcaaTGATATCATCATCATACAACAGGTCTGCTTACAATGTTATCAGTCCCACACTGGATAATTCCAGCGAGATTGACCTATGGAATTTTGCAAGATCAACATCATCGCTGTTGTCATCCTCGGAACCACTTTGCCACGTGTCCAACTCGCCAGTATA 1253 0.4485 MPESMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQQDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTDSTIVPNVMGDGSQEEGWVVCRIFKKKNHHKTLDSPLASSATAHMFDSSDEGALEQILRQMGRSCKEENDGGNNNGGFAKPRVFDSVAINSNNDYQLDRFMKLPSLESPKSTSLENGGGYQAIIPDMVAVTDNEGSFSTHQVNGGDPMVHHHHQMESSSSNGLNNWAALDRLVASQLNGQTEASRQLACFNDPTLGYCISADHDLQPMPTLRSSSFSSMISSSYNRSAYNVISPTLDNSSEIDLWNFARSTSSLLSSSEPLCHVSNSPV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02106 417 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Bva02g02106 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 9 357 - -
Bva02g02106 417 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Bva02g02106 417 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Bva02g02106 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 357 - -
Bva02g02106 417 SUPERFAMILY NAC domain 10 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02106 Bva-Chr2 21708913 21710968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02106 1 414 NAC Transcription Factor Family AT2G46770 54.333 6.62e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva02g02106 NAM 5.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02106 - - gmx:100793308 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02106 02 21708913 21710968 Bva02g02106 02 21708913 21710968 ECH