Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02105 ATGGGGAAGAAGGCAGGTAGCTCATGGCTCACTGCTGTGAAAAGGGCTTTCAGATCTCCAACAAAAGACAGCGAACACAGAAGTAGCAGAAGAAGAGACGACCATGACCAAGAAGAAGACGAAGACAAGaaaagagaaaaaagaagatggaTTTTCAGAAAACCTGTAAATCAGGAAAACGGACAAACCCCCCCGAAGGGGAAGCCTGATACATCTGCAAGTGGGACTTCAACTTGTGAACATGTATCTGTGACGGCAGAGGTGGCCGCCACCACAGATCAAAAGAATGAACTTGCTGCTGCGGTGGCCACCGCCCAGGCTTCGGTAGAAGTAGCCAGAATGAAGAGACCAAATAATCATGCCAGGGAGCAACACCGTGCTGCTCTTGTAATTCAAACTGCATTTAGAGGATACCTGGCAAGGAGAGCTCTTCGTGCACTAAAGGGGCTAGTAAAGTTGCAAGCTTTGGTGAGAGGGCATAATGTTAGGAAGCAAGCAAAGATGACCCTTCGGTGCATGCAAGCTCTGGTTAGAGTACAGTCTAGAGTGCTTGACCAGCGCAACAGGTTGTCACATGATGGTAGCAGAAAATCCACTTTCAGTGATACCAGTAGTGTCTTGGAATCACGGTATCTTCAAGACATTCTAGATAGAAAATCAGTGACAAGAGAGGCAAGCAGTATTGCCAGTGATTGGGATGAAAGACCGCACActgttgaagaaattaaagccATGTTGCAGCAGAGGAAAGAAGCAGCAATGAAGCGAGACAAGTCCTTGTCTGAAGCCTTCTCCCAACAGATTTGGAGGAAAGGAAGGAACCCATCAATTGGAAATGACAAGGAGCTTGAGGAGAGACCAATATGGCTCGATGGATGGATAGTGGCGAAGCCATGGGAAAGCAGAGCAAGAGCTTCAACTGATCAAAGAGATCCCATTAAAACAGTTGAAATTGATACCTCTCAGCCTTACTCATATCTAGGATCTAATTACAGAAGATCACAtccaaattatcaatataaccCACACCAACACCAAATACAACCACAAAGACATTCAGTTGCTTCCCCATTACAGAGAAGCCACCAATCTCCTGCAACTGCAACCCCTTCCCCTGCAAAATCAAGGCCTATCCAAGTCAGGTCTGCAAGCCCTCGTTGCTACAGAGAAGACAGAACCTTCCACAATACCTCTCAAACACCAAGCTTGAGGTCCAATTACCGTTACACAGGAAACTTGAATGAAAATGGTAGTTCAAGGACTGGAACAAGTAACAGTGGGGCTACATTGCCTAACTACATGGCGGCAACGGAGTCTGCAAAGGCGCGAATTCGGTCCCTGAGTGCGCCGAGGCAGAGGCCATCCACGCCGGAGAGGGACAGAGTAGGGTCAGCAAGGAAAAGGCTTTCTTTCCCCGTTCCTGAACCTTATGGGGCAGGAATGGGTTATGGCAGTTATTGCCACAGTCTAAGAAGTCCAAGCTTTAAGAGTCTGAGTGCATCACATTTTGGGTTGGAGCAGCAATCCAACTTTTCCTCTTGCTGCAGCGAGACTGCTGGTGATGGTGAGATTTCCCCTTCTTCAGCAAGTGACCTTAGAAGGTTTGTCGTTTTAGAGTTATTTCAATTAGCATGCTCACCCCAGAAAGAAACACCAGTACTTTACCTGCTAGGAAGCTG 1679 0.4586 MGKKAGSSWLTAVKRAFRSPTKDSEHRSSRRRDDHDQEEDEDKKREKRRWIFRKPVNQENGQTPPKGKPDTSASGTSTCEHVSVTAEVAATTDQKNELAAAVATAQASVEVARMKRPNNHAREQHRAALVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDQRNRLSHDGSRKSTFSDTSSVLESRYLQDILDRKSVTREASSIASDWDERPHTVEEIKAMLQQRKEAAMKRDKSLSEAFSQQIWRKGRNPSIGNDKELEERPIWLDGWIVAKPWESRARASTDQRDPIKTVEIDTSQPYSYLGSNYRRSHPNYQYNPHQHQIQPQRHSVASPLQRSHQSPATATPSPAKSRPIQVRSASPRCYREDRTFHNTSQTPSLRSNYRYTGNLNENGSSRTGTSNSGATLPNYMAATESAKARIRSLSAPRQRPSTPERDRVGSARKRLSFPVPEPYGAGMGYGSYCHSLRSPSFKSLSASHFGLEQQSNFSSCCSETAGDGEISPSSASDLRRWLR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02105 537 Gene3D - 121 176 - -
Bva02g02105 537 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Bva02g02105 537 MobiDBLite consensus disorder prediction 512 537 - -
Bva02g02105 537 MobiDBLite consensus disorder prediction 1 80 - -
Bva02g02105 537 MobiDBLite consensus disorder prediction 324 464 - -
Bva02g02105 537 MobiDBLite consensus disorder prediction 394 433 - -
Bva02g02105 537 MobiDBLite consensus disorder prediction 56 80 - -
Bva02g02105 537 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Bva02g02105 537 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
Bva02g02105 537 Pfam IQ calmodulin-binding motif 125 145 IPR000048 GO:0005515
Bva02g02105 537 MobiDBLite consensus disorder prediction 324 378 - -
Bva02g02105 537 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 537 - -
Bva02g02105 537 SMART iq_5 123 145 IPR000048 GO:0005515
Bva02g02105 537 SMART iq_5 146 167 IPR000048 GO:0005515
Bva02g02105 537 Pfam Protein of unknown function (DUF4005) 384 485 IPR025064 -
Bva02g02105 537 PANTHER IQ-DOMAIN 5-RELATED 1 537 - -
Bva02g02105 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 168 IPR027417 -
Bva02g02105 537 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02105 Bva-Chr2 21692113 21694781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02105 9 537 IQD Protein Family AT4G00820 57.321 4.27e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02105 - - adu:107472901 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02105 02 21692113 21694781 Bva12g01892 12 15200080 15202067 ECH
Bva02g02105 02 21692113 21694781 Bva02g02105 02 21692113 21694781 ECH
Bva02g02105 02 21692113 21694781 Bva08g01981 08 13277700 13280726 ECH