Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02096 ATGGACCACTTAATGATCTCTCCTACTTCATCTTCCTCTCTCGTCTTGGAAACGCCACCGACCCTTCAGCAAAAGCTTCAGTTTTTACTGCAGAGCCAGCAAGATGGGTGGGTCTACGCCATTTTCTGGCACACCTCATATGATGACAATGGCAACCTCTTCCTCTCTTGGGGCGATGGCCATTTCCAAGGCAACAAAGACACTTCCCCAAGCACCAACTCTCACAATTACCCCATTTTAACGCAGCTTTACAATGAGAGAAGGAAAGTCAGGAAGGGAATCCAATCTCTCATCAACGACAACGACAACGACAACAGCATCATGGATCATATGAGCTCAAACGGCGACCTCAATGACGCTGAGTGGTTCTACGTCATGTCGTTAGCCCGCACCTTCCCGATTGGTGACCATCATCATCGTGGTTCTTACTCTCTCCTCGGCAAGGCCTTCACTTCCGGTACTTCGATTTGGGTGAACAGTAAGCATGAGCTCCAGTTTTACAACTGCGAAAGAGCCAAAGAGGCTTTCATGCATGGGATCGAAACCCTGGTTTGCATCCCAACCTCTAACGGAGTTGTCGAGATGGGCACCGATGTTGCCATCACAGAAAACTGGGGCCTGATTCAACAAGTCAATTCCCTCTTTGGCTCAGATCTTATTGCTCTATCTCACACAAAGCAACCAAACCCAATACAGTTCTTTGATGACCACAACATCTCCTTCGCCGACATCGGCATTATCGCCGGCGTCCAAGAAGAGGATAATTCCACTCCTACCCACCAcgataaaagaaagagatcgGAAACTAGAGACAATGACATTTCCGGTGTGAAACTCGGATCCTCTTACGTAGATTCAGAACACTCCGATTCAGATTTTCCATTGGTTACCGCTTCAAATGCCATGTTAGAGAAAAGGCCACCCaagaagagaggaagaaaaccTGGTCTCGGCCGTGAGACCCCGTTGAACCACGTGGAGGCAGAGAGGCAGCGGCGGGAGAAGCTGAACCACCGATTCTATGCACTGAGAGCGGTGGTGCCAAACGTGTCGAGAATGGACAAGGCTTCTTTATTATCGGATGCTGTTTCTTATATCAACGAGTTGAAAGCGAAGATCGAAGATTTAGAGTCAAAGCTGGAGAAGGAGAGTACTAAGAAAGTGAAAGTGGAAACGGCGGATACTACGGATAACCAGAGCACCACAACCTCTACGGTGGAACAAACGGGGCCTAGTGCTAATGGttcttctacttcttcttcttcttcttcttctgttgaGGTTGAGGTAAAGGTTATGGGAGCAGATGCTATGGTGAGGGTTCAATCGGAGAACACGAACCACCCGGGAGCCAGATTAATGGGTGCATTGAGGGAGCTGGAGTTTCAGGTTCACCATGCCAGCATGTCGTGTGTTAATGATATAATGCTTCAAGATGTTGTGGTGAAGCTTCCTCAAGGGTTGAGAAGCGAAGAAGGTCTAAGATCTGCAATTCTCACAAGACTTGAACATTA 1514 0.4604 MDHLMISPTSSSSLVLETPPTLQQKLQFLLQSQQDGWVYAIFWHTSYDDNGNLFLSWGDGHFQGNKDTSPSTNSHNYPILTQLYNERRKVRKGIQSLINDNDNDNSIMDHMSSNGDLNDAEWFYVMSLARTFPIGDHHHRGSYSLLGKAFTSGTSIWVNSKHELQFYNCERAKEAFMHGIETLVCIPTSNGVVEMGTDVAITENWGLIQQVNSLFGSDLIALSHTKQPNPIQFFDDHNISFADIGIIAGVQEEDNSTPTHHDKRKRSETRDNDISGVKLGSSYVDSEHSDSDFPLVTASNAMLEKRPPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEDLESKLEKESTKKVKVETADTTDNQSTTTSTVEQTGPSANGSSTSSSSSSSVEVEVKVMGADAMVRVQSENTNHPGARLMGALRELEFQVHHASMSCVNDIMLQDVVVKLPQGLRSEEGLRSAILTRLEH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02096 504 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 22 215 IPR025610 -
Bva02g02096 504 Gene3D - 318 385 IPR036638 GO:0046983
Bva02g02096 504 MobiDBLite consensus disorder prediction 250 291 - -
Bva02g02096 504 SMART finulus 326 375 IPR011598 GO:0046983
Bva02g02096 504 PANTHER MYC 1 502 IPR045084 GO:0003700|GO:0006355
Bva02g02096 504 CDD bHLH_AtAIB_like 318 388 - -
Bva02g02096 504 Pfam Helix-loop-helix DNA-binding domain 324 369 IPR011598 GO:0046983
Bva02g02096 504 MobiDBLite consensus disorder prediction 303 331 - -
Bva02g02096 504 MobiDBLite consensus disorder prediction 394 426 - -
Bva02g02096 504 Coils Coil 359 393 - -
Bva02g02096 504 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 369 IPR011598 GO:0046983
Bva02g02096 504 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 382 IPR036638 GO:0046983
Bva02g02096 504 MobiDBLite consensus disorder prediction 255 273 - -
Bva02g02096 504 PANTHER TRANSCRIPTION FACTOR BHLH14 1 502 - -
Bva02g02096 504 MobiDBLite consensus disorder prediction 314 331 - -
Bva02g02096 504 MobiDBLite consensus disorder prediction 380 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02096 Bva-Chr2 21649464 21651420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02096 12 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 37.149 7.03e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva02g02096 bHLH-MYC_N 3.4e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02096 - K13422 qsu:111993276 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02096 02 21649464 21651420 Bva02g02096 02 21649464 21651420 ECH