Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02093 ATGGGCACCGGAGAGAAGAGTCTAAAGAGCTTTCAATTGCATCGCTCCCATCTTCCTCATCACCACCACAGCGGCAGTCATGGCAAGAAGCAAGGGTTCACAGATGTTCCAAAAGGGTGTCTTGCAATCAAGGTTGGTCAGGGAGAAGAACAACAGAGGTTTGTGGTGCCCGTGATCTACTTCAATCACCCTCTGTTCATGCAGCTGCTGAAGGAGGCAGAGGAGGAATATGGATTCGATCAGAAGGGAACCATAACAATTCCCTGCCACGTGGAGGAGTTCCGGAACGTTCGAGGCAAGATTGATCGGGAAAAGTCCCTTCATCACCACCATCATGTGGGTTGCTTTGGCTTCtg 356 0.5028 MGTGEKSLKSFQLHRSHLPHHHHSGSHGKKQGFTDVPKGCLAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGKIDREKSLHHHHHVGCFGF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02093 118 MobiDBLite consensus disorder prediction 1 33 - -
Bva02g02093 118 Pfam Auxin responsive protein 30 97 IPR003676 GO:0009733
Bva02g02093 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 112 IPR003676 GO:0009733
Bva02g02093 118 PANTHER SMALL AUXIN-UP RNA-RELATED 29 112 - -
Bva02g02093 118 MobiDBLite consensus disorder prediction 13 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02093 Bva-Chr2 21620769 21621705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02093 35 114 Calmodulin-binding Proteins AT5G20810 48.148 5.30e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02093 K14488 - pvy:116108881 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02093 02 21620769 21621705 Bva02g02093 02 21620769 21621705 ECH
Bva02g02093 02 21620769 21621705 Bva08g01966 08 13200346 13201119 ECH