Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02084 ATGATTCTTTTCAAccctatttttcttataattctgatatttttcatattttatctgATTCGGGTCCTTGTATACGTATCTGGGTTGATATATTGGGTGAAGAAATGGTTGAGAATATTTGAAGATTGTTTTCATGTTTACCAGTTTTTCAGAGTCCCAGAACTCAACGAAAGCACGCAGGAGAATCCACTGTACAGAAAGGTCTCTCTCTACTTGCATTCTTTATCCGCCATTGAAGATTCTGACTTTACCAACCTCATCACCGGCGAGAAGCCAAACGACATCGTTCTCCGCCTCAACCCCAAACAAATCATCGAAGATGATTTTCTTGGAGCCAGAGTATTCTGGCTCAACGAAAAAACAGAATTCAGTTCCAACCGCAGCAGAACTCTGATACTCAAAATCCGAAGAGCCGACAAACGGCGAATTCTCAGCCCGTATCTCCAGCACATCCACACCGTAGCCGATGAAATCGAGCAACAGGGAAAGCGTGATTTGAAGCTTTTCATGAACGTTGACCCCGATGGACGGTGGAGATCCGTTCCGTTCACTCATCCATCAACCTTCGACACAATCACCATGGAAGATGATCTTAAGGACAAGATCAAATCCGACCTGGAATCGTTCCTCAGAGCCAAACAGTACTATCACCGATTGGGGCGAGTATGGAAACGGAGTTTCCTCTTATATGGTCCCTCCGGCACTGGAAAATCGAGCTTCGTCGCTGCCATGGCGAATTTCCTCTGCTACGACGTTTACGACATCGATCTCTCGAAGGTTCCGAGCGATTCAGATCTGAAATTTTTGTTGCTACAAACAACAGCGAAATCGATCGTCTTGATAGAAGACCTTGACCGGTTCCTGACGGAGAGATTAACGGCTGTGAGCCTATCAGGCGTGTTGAACTTCATGGACGGCATTTTGAACTCGTGCTGCGCCGACGAGAGGGTCATGGTGTTCACgatgaacaagaaagaccatatCGACCCGAATGTGCTCCGGCCGGGTCGGATCGACGTCCATATCAATTTTCCACTCTGCGATTTCTCGGCGTTTAAAACGCTGGCGAATAGTTATTTGGGGGTGAAAGATCACAAGCTATTCCCTCAGGTTCAGGAAATTTTTGATAACGGCGCAAGTTTGAGCCCAGCCGAGATCGGCGAGTTGATGATAGCCAACCGGAGCTCGCCGAGCCGAGCCATCAGGTCGGTGATCAGCGCGCTGCAAACAGACGGCGAGGGGAGGGGGAACGGGAAGATCGGACGGCAGTTAGGGAATAACGGGGAGGACTTGGATGAATTGGAACCGGTGGTTGGGCTGTGTACTGGTAGTTTCCAAACGGTTAAGGATTTTGGGAAATTGTACGGTTTATTAAGattgaaaaacaagagaaaatctGGGTCGTTCGATGTTGCCCAATG 1421 0.4581 MILFNPIFLIILIFFIFYLIRVLVYVSGLIYWVKKWLRIFEDCFHVYQFFRVPELNESTQENPLYRKVSLYLHSLSAIEDSDFTNLITGEKPNDIVLRLNPKQIIEDDFLGARVFWLNEKTEFSSNRSRTLILKIRRADKRRILSPYLQHIHTVADEIEQQGKRDLKLFMNVDPDGRWRSVPFTHPSTFDTITMEDDLKDKIKSDLESFLRAKQYYHRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDIDLSKVPSDSDLKFLLLQTTAKSIVLIEDLDRFLTERLTAVSLSGVLNFMDGILNSCCADERVMVFTMNKKDHIDPNVLRPGRIDVHINFPLCDFSAFKTLANSYLGVKDHKLFPQVQEIFDNGASLSPAEIGELMIANRSSPSRAIRSVISALQTDGEGRGNGKIGRQLGNNGEDLDELEPVVGLCTGSFQTVKDFGKLYGLLRLKNKRKSGSFDVAQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02084 473 SMART AAA_5 223 348 IPR003593 -
Bva02g02084 473 PANTHER BCS1 AAA-TYPE ATPASE 8 431 - -
Bva02g02084 473 Pfam ATPase family associated with various cellular activities (AAA) 228 346 IPR003959 GO:0005524|GO:0016887
Bva02g02084 473 PANTHER BNAC04G00800D PROTEIN 8 431 - -
Bva02g02084 473 Gene3D - 179 346 IPR027417 -
Bva02g02084 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 408 IPR027417 -
Bva02g02084 473 CDD AAA 224 346 - -
Bva02g02084 473 Pfam Domain associated at C-terminal with AAA 34 116 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02084 Bva-Chr2 21552139 21554010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02084 219 344 Calmodulin-binding Proteins AT3G56690 27.857 1.19e-08 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02084 02 21552139 21554010 Bva02g02084 02 21552139 21554010 ECH
Bva02g02084 02 21552139 21554010 Bva08g01959 08 13126150 13128059 ECH