Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02079 ATGGAGGAAAAACCATTTGCTGCATGGTCATGGTCTGTTGAGCAGTGTTTGAAAGAGTACGGTGTGAGACTGGACAAGGGTCTGAGTACTTATGAGGCTGAGAAGCGGCGAGAGAAATATGGTTGGAATGAGctaacaaaagagaaagggaagcCCTTGTGGCAACTGGTGCTGGAACAGTTTGATGACATGCTCGTAAAGATACTTTTGGTTGCAGCTTTCATATCATTTATTCTAGCTTACTTGCACGGGAGTGAATTAGGAGAATCTGGATTTGAGGCTTATGTGGAACCACTCGtgattgttttgattttagttCTTAATGCCATTGTTGGAGTTTGGCAAGAGAGTAATGCCGAAAAAGCTCTTGAAGCTCTTAAAGAGTTGCAATCTGAATCCGGAAAGGTGTTAAGGGATGGCTTTTTTGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCAGGTGATATTGTGGAATTGCGTGTTGGAGATAAAGTCCCTGCAGACATGAGAATTGCAGATTTGAAAACGTCAACATTGCGAGTTGAGCAAAGCTCATTAACTGGAGAAGCTATGCCTGTTTTGAAAGGTACTATTCCTATTTTCTTCGATGAGTGCGAGTTGCAGGccaaagaaaatatggttTTTGCAGGCACCACAATTGTCAATGGGAGCTGTCTCTGTATTGTAATTATGACAGGAATGAACACTGAAATTGGGAAGATACAGAAACAAATACACGAGGCTTCTCTGGAGGACAGTGACACTCCTTTGAAGAAGAAGCTAGATGAATTTGGTGGTAGGCTTACCACTGCAATTGGACTAGTTTGCCTCATTGTCTGGGTTATAAACTACAAAAACTTCCTTTCTTGGGATGTTGTTGATGGATGGCCCTCAAATGTccgtttttcttttgagaagTGCacctattattttaaaattgctgTTGCGCTTGCTGTAGCTGCAATTCCTGAAGGTCTTCCAGCCGTTATCACAACTTGTTTAGCCCTTGGTACAAGAAAAATGGCacaaaaaaatgcaatagTGCGAAAGCTTCCGAGTGTAGAAACATTGGGCTGTACAACTGTTATTTGTTCAGATAAAACTGGGACTTTGACAACAAATCAGATGTCTGTAACAGAGTTCTTTACTTTGGGAGGTAAAACCACAGCTTCTCGAGTCTTCCATGTCGAGGGCACAACTTATGATCCAAAGGATGGAGGAATTGTTGATTGGACTTGCTATAACATGGATGCCAATTTGCAAGCCGTGGCAGAGATATGTGCTGTTTGTAATGATGCtggaatttattttgatgaccGACTTTTCCGAGCCACAGGTTTGCCCACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGAGTTCCAGATGTCAAGGCAAGGAACAAAATTCGTGATGCACAACTTGCTGCAAACTATTTGATTGATAGCAACACCAAGAAGTTAGGTTGTTGTGAATGGTGGACAAGAAGATGCAAAAGGGTTGCTACACTGGAGTTTGATCGTGTTCGGAAGTCTATGAGTGTGATTGTCCGTGAACCCACTGGGCGGAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTGGAACGTAGTTCACATGTGCAACTTGCCGATGGATCCCTGGTTCCAATAGATGAACCATGTAGGGAACTTCTTCTTTTAAGACTCCTGGAGATGAGTTCGAAGGGATTGCGTTGCTTGGGTTTGGCATATAAGGATGAACTGGGGGAGTTTTCAGACTATTATGCTGAGAGTCATCCTGCCCATAAGAAACTGCTTGATTCTTCTTGTTATGCATCCATTGaaagtgatataatttttgttggtGTTGTTGGTCTAAGGGACCCTCCTCGTGAGGAAGTTCATAAAGCAATTGAGGATTGCAGGGAAGCTGGTATTAGAGTAATGGTGATAACTGGAGATAATAAGTCCACAGCGGAGGCTATTTGCAAAGAAATCAGATTATTCTCCAAAGATGAGGATCTTACAGGGCAAAGTTTTACTGGTAAGGAATTTATGTCTCTTCCTACTTCAGAACAAGTTAAAATACTGTCAAGGCCTGGGGGCAAGGTTTTCTCTCGAGCTGAGCCTAGGCACAAGCAAGAAATTGTGAGGTTACTGAAGGAAATGGGAGAAATTGTTGCAATGACTGGAGACGGTGTAAATGATGCACCTGCCCTTAAACTTGCTGATATAGGGATTGCCATGGGCATTACTGGAACAGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAATTTTAGCACCATTGTTTCAGCTGTTGCCGAGGGTCGCTCCATTTATAATAACATGAAAGCATTTATCAGGTACATGATATCATCGAATGTTGGAGAAGTAATATCCATATTCTTGACTGCTGCTCTGGGGATCCCAGAATGTTTGATACCTGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCACCTGCCACAGCTCTCGGATTTAACCCTGCTGATGTTGACATAATGCGGAAGCCACCTCGCAGAAGTGATGATTCTCTTATAAATTTGTGGGTTCTTTTTCGCTATCTAGTAATTGGGTCCTATGTGGGAATTGCAACTGTTGGAATTTTTGTCTTGTGGTTCACCCAAGCATCTTTCCTGGGCATTAATCTTGTCAGCGATGGACACACAATAGTTGAATTGTCTCAGCTTCGTAACTGGGGGGAGTGTCATTCATGGTCAAATTTTACTGCAGCTCCGTTTGTGGTTGGTGGAGGTCGCGTGATCTCATTTTCCGATCCATGTGACTATTTTTCAGTTGGCAAAGTGAAGGCCATGACTTTGTCTCTCTCAGTTTTGGTGGCGATTGAGATGTTCAACTCCTTGAATGCTCTTTCTGAAGACAATAGCTTGTGCAAAATGCCACCTTGGAGGAACCCATGGCTGTTGGCAGCCATGTCAGTATCTCTAGGACTGCATTGCCTCATACTATATACTCCATTCCTCGCAAGTGTTTTTGGCATTGTTCCCCTTAGTTTGAACGAGTGGTTCGTAGTCATTCTAATATCGATGCCTGTTATACTTATTGACGAGGTTCTAAAATATGTGGGGAGGAGTCGAAGATGGGTcacaaagaaggaaaagacaGCGTG 3155 0.412 MEEKPFAAWSWSVEQCLKEYGVRLDKGLSTYEAEKRREKYGWNELTKEKGKPLWQLVLEQFDDMLVKILLVAAFISFILAYLHGSELGESGFEAYVEPLVIVLILVLNAIVGVWQESNAEKALEALKELQSESGKVLRDGFFVPDLPARELVPGDIVELRVGDKVPADMRIADLKTSTLRVEQSSLTGEAMPVLKGTIPIFFDECELQAKENMVFAGTTIVNGSCLCIVIMTGMNTEIGKIQKQIHEASLEDSDTPLKKKLDEFGGRLTTAIGLVCLIVWVINYKNFLSWDVVDGWPSNVRFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTTASRVFHVEGTTYDPKDGGIVDWTCYNMDANLQAVAEICAVCNDAGIYFDDRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDAQLAANYLIDSNTKKLGCCEWWTRRCKRVATLEFDRVRKSMSVIVREPTGRNRLLVKGAVESLLERSSHVQLADGSLVPIDEPCRELLLLRLLEMSSKGLRCLGLAYKDELGEFSDYYAESHPAHKKLLDSSCYASIESDIIFVGVVGLRDPPREEVHKAIEDCREAGIRVMVITGDNKSTAEAICKEIRLFSKDEDLTGQSFTGKEFMSLPTSEQVKILSRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRRSDDSLINLWVLFRYLVIGSYVGIATVGIFVLWFTQASFLGINLVSDGHTIVELSQLRNWGECHSWSNFTAAPFVVGGGRVISFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLCKMPPWRNPWLLAAMSVSLGLHCLILYTPFLASVFGIVPLSLNEWFVVILISMPVILIDEVLKYVGRSRRWVTKKEKTA 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02079 1051 CDD P-type_ATPase_SERCA 9 1039 - -
Bva02g02079 1051 ProSitePatterns E1-E2 ATPases phosphorylation site. 366 372 IPR018303 -
Bva02g02079 1051 Gene3D - 26 248 - -
Bva02g02079 1051 SFLD p-type atpase 345 778 IPR044492 -
Bva02g02079 1051 SFLD Haloacid Dehalogenase 345 778 - -
Bva02g02079 1051 SMART Cation_ATPase_N_a_2 7 81 IPR004014 -
Bva02g02079 1051 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 302 388 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02079 1051 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 699 807 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02079 1051 PRINTS Sodium/potassium-transporting ATPase signature 979 1003 - -
Bva02g02079 1051 PRINTS Sodium/potassium-transporting ATPase signature 357 378 - -
Bva02g02079 1051 SUPERFAMILY HAD-like 362 830 IPR036412 -
Bva02g02079 1051 PRINTS P-type cation-transporting ATPase superfamily signature 726 745 - -
Bva02g02079 1051 PRINTS P-type cation-transporting ATPase superfamily signature 750 762 - -
Bva02g02079 1051 PRINTS P-type cation-transporting ATPase superfamily signature 364 378 - -
Bva02g02079 1051 PRINTS P-type cation-transporting ATPase superfamily signature 640 650 - -
Bva02g02079 1051 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Bva02g02079 1051 PRINTS P-type cation-transporting ATPase superfamily signature 618 629 - -
Bva02g02079 1051 PANTHER CALCIUM-TRANSPORTING ATPASE 5 1044 - -
Bva02g02079 1051 Pfam haloacid dehalogenase-like hydrolase 617 740 - -
Bva02g02079 1051 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 5 1044 - -
Bva02g02079 1051 SUPERFAMILY Calcium ATPase, transduction domain A 135 244 IPR008250 -
Bva02g02079 1051 Gene3D - 361 771 IPR023214 -
Bva02g02079 1051 Pfam Cation transporter/ATPase, N-terminus 9 76 IPR004014 -
Bva02g02079 1051 Gene3D - 374 625 IPR023299 GO:0000166
Bva02g02079 1051 Pfam Cation transport ATPase (P-type) 429 543 - -
Bva02g02079 1051 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 371 622 IPR023299 GO:0000166
Bva02g02079 1051 Pfam E1-E2 ATPase 129 344 - -
Bva02g02079 1051 Gene3D - 59 1039 - -
Bva02g02079 1051 SUPERFAMILY Calcium ATPase, transmembrane domain M 8 1041 IPR023298 -
Bva02g02079 1051 Pfam Cation transporting ATPase, C-terminus 811 1037 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02079 Bva-Chr2 21530543 21535681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02079 2 1048 Primary Pumps ATPases(2) AT4G00900 79.753 0.0 1712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02079 K01537 - vvi:100253574 1864.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02079 02 21530543 21535681 Bva02g02079 02 21530543 21535681 ECH