Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02068 ATGGGAAGAGCTCCTTGCTGTTCTAAAGTCGGGTTGCACAGAGGCCCATGGACTCCCAGAGAAGATGCATTGCTCACCAAGTATATACAAGCTCACGGCGAAGGCCAATGGAGATCCTTACCAAAAAGAGCAgGGCTTCTGAGATGTGGAAAGAGTTGCAGACTAAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGCAACATAACGGCGGAAGAGGATGACCTCATCATACGAATGCATTCCCTTTTGGGAAACCGATGGTCCCTCATCGCCGGCCGGCTACCCGGCCGGACAGACAACGAAATAAAGAATTACTGGAACACCCATCTCAGCAAACGGTTGAGAAAACAGGGAACCGACCCCAACACCCACAAGAAATTAACGGATCCTGAACTAAAACCGCAAGATCAAAcgacaaagagaaagaacaaaaacgACAAcagcaagaagaagaagaagaagcagaacaAAAAAGACAAGAGCAAAAACGCAGAAGCAGAGAGGACCATAGTTTATCTACCAAAGCCCATTAGGGTGACAGCCTTTTCTTTGCCCAGAAGTAATAGCACTTTCACTTTAGATTCCAACAATTCAGCTAGTGGATCCACCAGCCAAGAGAAAGATCAGGAAGAAGGGTTTGCGGGGAACTGTCAGGAGGTAAACGACAATGTGCTTTGGAGATCATCAGAGTATCATAACGAGGGAGAAAACGACGAGCTCGgatttttaaatgaagaaCATGACTTGGTCAATGGCGGCTCTGATGACATGGAATGCCAATCTGATTTCCCCACGTTGGAGAAGGTTTACGAAGAGTACTTGCAACTCTTGAAGACGGATGGAAACCAAGAGGAATTGGAGTCTTTTGCTGAATCTTTGTTTGTATG 893 0.43 MGRAPCCSKVGLHRGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITAEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRLRKQGTDPNTHKKLTDPELKPQDQTTKRKNKNDNSKKKKKKQNKKDKSKNAEAERTIVYLPKPIRVTAFSLPRSNSTFTLDSNNSASGSTSQEKDQEEGFAGNCQEVNDNVLWRSSEYHNEGENDELGFLNEEHDLVNGGSDDMECQSDFPTLEKVYEEYLQLLKTDGNQEELESFAESLFV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02068 297 MobiDBLite consensus disorder prediction 115 145 - -
Bva02g02068 297 MobiDBLite consensus disorder prediction 189 215 - -
Bva02g02068 297 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 288 - -
Bva02g02068 297 Coils Coil 149 171 - -
Bva02g02068 297 CDD SANT 16 61 IPR001005 -
Bva02g02068 297 PANTHER MYB TRANSCRIPTION FACTOR 1 288 - -
Bva02g02068 297 Gene3D - 14 66 - -
Bva02g02068 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva02g02068 297 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva02g02068 297 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva02g02068 297 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva02g02068 297 SMART sant 13 63 IPR001005 -
Bva02g02068 297 SMART sant 66 114 IPR001005 -
Bva02g02068 297 Gene3D - 71 116 - -
Bva02g02068 297 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva02g02068 297 CDD SANT 71 112 IPR001005 -
Bva02g02068 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva02g02068 297 MobiDBLite consensus disorder prediction 115 169 - -
Bva02g02068 297 MobiDBLite consensus disorder prediction 189 213 - -
Bva02g02068 297 MobiDBLite consensus disorder prediction 146 160 - -
Bva02g02068 297 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02068 Bva-Chr2 21485622 21486718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02068 4 141 MYB Transcription Factor Family AT3G13540 68.345 4.45e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g02068 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02068 K09422 - gmx:778044 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02068 02 21485622 21486718 Bva02g02068 02 21485622 21486718 ECH