Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02063 ATGGGTTCCCAGGAAACAGGGAAAGCCATGAGAACCCATCAGCCATGTGCAGCTTGCCGGATGCTCCGCCGGAGATGTGATACTAGGTGCTTGCTTGCACCATATTTCCCGGCTGATGAGCTTGACAAGTTCATGGGAGTGCATAGAGTCTTCGGCGCTAGCAACGTTATCAAAATGATTCAGATGGCGGAGGAGGCAAAGAGGGATGATGCAGTTAAAGCCATAGTTTATGAAGCGAAAGCAAGACTAAGAGACCCAATTTACGGTAGTGCTGGAGCAATCTCGAACCTGCAAAAGATGGTTCAGGAACTGGAAATGCAGTTGGAAGCAATAAGAACTAGGGTTTCAGAgctgaaacaagaaagagatcAGTTGTTGAGCAATATTCACATGAAGGGTCATCATGTTGATCCTGTCTACGCCATCAATGAACCTTTTTCTGATGGTTATGGTTTATCATCAGTAGATGTAAATGGTGAAACCATGGCATATGACCCAGTTCAGTTTCCTGTAGAAGGTGACTACTGGGTTTTCTa 536 0.4384 MGSQETGKAMRTHQPCAACRMLRRRCDTRCLLAPYFPADELDKFMGVHRVFGASNVIKMIQMAEEAKRDDAVKAIVYEAKARLRDPIYGSAGAISNLQKMVQELEMQLEAIRTRVSELKQERDQLLSNIHMKGHHVDPVYAINEPFSDGYGLSSVDVNGETMAYDPVQFPVEGDYWVF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02063 178 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Bva02g02063 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 155 - -
Bva02g02063 178 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Bva02g02063 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 6 155 - -
Bva02g02063 178 Coils Coil 94 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02063 Bva-Chr2 21459706 21460464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02063 15 167 AS2 family AT1G07900 43.038 4.30e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva02g02063 LOB 4.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02063 - - pvy:116111976 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02063 02 21459706 21460464 Bva02g02063 02 21459706 21460464 ECH