Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02056 ATGGAGCAACCACCATACTCTGAAGATGAACTAGTCGCCACAGTCTCCGCCGCAGAAAAACCCGACAACCCAGGTGGTGGCATGCGACACCCAGTATACCGCGGCGTCCGCAAGCGGCGGTGGGGTAAATGGGTGTCTGAAATTCGGGAGCCACGCAAGAAATCCCGAATATGGCTCGGGTCTTTTCCGGTGCCGGAGATGGCAGCGAAAGCATATGACGTCGCAGCGTACTGCTTAAAGGGAAGAAAAGCGCAGCTTAATTTTCCTGATGAGGTCAAGGAGTTGCCGCTGCCGTCCACGTGTACAGCCAGGAATATTCAGGCCGCAGCTGCGAAGGCGGCGCGCATGATGAAAACTTCGGCTTCAAAGAGCAGCATAACATCTTCCGAGGGCAACGGCGACAGCCACAGTGATGATTTCTGGGGTGAGATTGAATTGCCGGAGCTCATAAATAATGGGTACAATTGGAATTCTACATGTACGTCTCCATGGATTTCCTCCGGTGACATTACGGCGTGGTCGGAGGTGGAGCTTCCTCCGCAGCCACCTTACATGGCGTGTCCATA 566 0.5424 MEQPPYSEDELVATVSAAEKPDNPGGGMRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVKELPLPSTCTARNIQAAAAKAARMMKTSASKSSITSSEGNGDSHSDDFWGEIELPELINNGYNWNSTCTSPWISSGDITAWSEVELPPQPPYMACP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02056 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 187 - -
Bva02g02056 188 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Bva02g02056 188 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 187 - -
Bva02g02056 188 CDD AP2 33 90 IPR001471 GO:0003700|GO:0006355
Bva02g02056 188 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Bva02g02056 188 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Bva02g02056 188 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Bva02g02056 188 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Bva02g02056 188 PRINTS Ethylene responsive element binding protein signature 71 91 IPR001471 GO:0003700|GO:0006355
Bva02g02056 188 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02056 Bva-Chr2 21402124 21402690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02056 1 187 AP2-EREBP Transcription Factor Family AT1G01250 55.385 1.32e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g02056 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02056 K09286 - tcc:18613963 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02056 02 21402124 21402690 Bva02g02056 02 21402124 21402690 ECH