Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02038 ATGGAGGACGTCAACAACAACAGAAACAGCAATAACAAAGTCTACAATCTCTTCGTGAAGCTGTTGGATGgaaaaaccctaaccctaagaTTCCCAACTCCGACCCTATACGGGAATTGCATAAAGGATCGCCTTTACGAAGTTACCAGGATCCTGCCACAACATCAGCGCCTCCTCACCGGCGTTCAACGCCTCGAAGATGACAAAGCTATTATCTCCTGCTCCCCCGACGGGGACGAGATGTTCCCCATCGTCCACCTGCTCTCACGGCTTGCTGGTGGCAAGGGAGGCTTTGGGTCGCTTTTGCGTGGCGCGGCTACAAAGGCTGGGCAGAAGAAGACAAACAATTTCGATGCTTGTAGAGATATGAGTGGACGAAGGCTAAGACATGTAAATGCGGAGAAGAGATTGGAAGAGTGGAGGGCAGAGGAGGCCGAGAGGAAACTTGAGAAAGTGGCGGAAGAGTTTCTGAAGAAGCAAGCAAAAAAGGGTAAGAAGGGTGTGGGTGAAGGCGAGGCACATAAGTATGTGGCCAAATATAGGGAGGTGTCTGAGCGGTGCACAGCAGAGGTTGCCGAGTCCGTAAAGGAGGCTCTGATGTCGCTCAATGGAAAGCGAAAGGGTTCAGAAACTGCAAAAGATAAAGCAGATGCTAAAAAGCTTAAGATATGGATGGGAAAGAGAACATTAAATGAAAGCGATAGCGAGGAAGATGAAAGTAATGATGAAGGGGAGAATGAAAAATCTGTTGTATTAAATATTGGGAATGATTCAGACTCAAATAAGGAATCTGAATGTAGTCCAAGATCAGTAATTGGTAAGAAACAAGGTGGAGAATATTCTGGTTCAGGCTCAACTGAAAGTGGAtctgaagaagagaaagagaccGTTTTAAGGGGCAAAGTGGAATCTGGTGAATTCCCGAGTAGTGAATCTCTTCAAGTTGAAGCTGCTGAACCTAGTGGTGTGGTTGAACCTCTGATATATGATGAGAAGATGGCAAAGGATGTAGCTATGCGTTGTTCAGAGTCTGTGACTGGTGCAATTAATTCTGAAGAAGCTATTAAACATGATGGTGGTGGAGCTGTATATGACAAGTTTGATGTAGCTGTTGGTCAGCCCTCTAATATTCTGAGTGCAGAACATGTAACTGGTGCTAGCATATCAAATGATATGGAAATGGATGGATCTGCTGAACGTAAAGCATCAGTTCATGACAAAACCTCCACAAGTGCCAGTTTTCCACAAATAGAAGAGCCTCTGAATTTTGATGCTATTAATTCTGCCGCAGAACTTGAGGTTCTTGGTATGGAAAGGTTGAAGTCTGAACTGCAGGCACGTGGGTTAAAATGTGGAGGTGCTTTAGAAGAGCGTGCTGCTCggcttttccttttaaaatcgACTCCACTGgataaaattccaaaaaagcTGCTAGCAAAGAAATG 1445 0.4291 MEDVNNNRNSNNKVYNLFVKLLDGKTLTLRFPTPTLYGNCIKDRLYEVTRILPQHQRLLTGVQRLEDDKAIISCSPDGDEMFPIVHLLSRLAGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWRAEEAERKLEKVAEEFLKKQAKKGKKGVGEGEAHKYVAKYREVSERCTAEVAESVKEALMSLNGKRKGSETAKDKADAKKLKIWMGKRTLNESDSEEDESNDEGENEKSVVLNIGNDSDSNKESECSPRSVIGKKQGGEYSGSGSTESGSEEEKETVLRGKVESGEFPSSESLQVEAAEPSGVVEPLIYDEKMAKDVAMRCSESVTGAINSEEAIKHDGGGAVYDKFDVAVGQPSNILSAEHVTGASISNDMEMDGSAERKASVHDKTSTSASFPQIEEPLNFDAINSAAELEVLGMERLKSELQARGLKCGGALEERAARLFLLKSTPLDKIPKKLLAKK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02038 481 MobiDBLite consensus disorder prediction 251 267 - -
Bva02g02038 481 Coils Coil 128 162 - -
Bva02g02038 481 SUPERFAMILY Ubiquitin-like 9 79 IPR029071 -
Bva02g02038 481 Gene3D - 2 95 - -
Bva02g02038 481 Pfam Replication stress response SDE2 C-terminal 406 480 - -
Bva02g02038 481 Pfam Silencing defective 2 N-terminal ubiquitin domain 15 165 IPR024974 -
Bva02g02038 481 CDD Ubl_ubiquitin_like 17 82 - -
Bva02g02038 481 PANTHER SPLICING FACTOR SF3A-RELATED 16 480 - -
Bva02g02038 481 PANTHER REPLICATION STRESS RESPONSE REGULATOR SDE2 16 480 - -
Bva02g02038 481 MobiDBLite consensus disorder prediction 394 413 - -
Bva02g02038 481 MobiDBLite consensus disorder prediction 228 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02038 Bva-Chr2 21294763 21297079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02038 414 480 C2H2 Transcription Factor Family AT5G06160 43.284 1.61e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02038 K25059 - gmx:100781694 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02038 02 21294763 21297079 Bva02g02038 02 21294763 21297079 ECH