Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02030 ATGAATATCAGGAGGCTTAAACGTTTGAGGAACGAAATTTTTGATCCTTGGGAGCCATTATTCAGGAGATGGAACAAGATATTTGTATGCACATGTTTGATAGCAGTCTTTGTTGACTTGCTCTTCTTCTACATACCCAAGGTCAACGAGCAGGAAAAATGCCTAGACTGGGATGGAGGCTTGAAGATTACCGCATGTGTTCTTCGTTCAATCTTTGATCTTATTTATGTTCTTCGTATCATCTTTCAGTTTCGCACTGGGTTTATTGCGTCTTCTTCTAGAATACTTGGAAGTGGTGAGCTCGTTGCTGATTCTGTCACTACAGTGAAAAAATACTTGTTTGGGTACTTTGTCGTTGACATTCTATCGATCATTCCAGTGCCACAGGTGGTTGTTTTAGGTAACATTCAGATTCTGAAAAGCTTGTTTCCAGTTGACACGATTAACTTGTTGAAGATCATAACACTTGTCCAGTTTTATCCAAGAGTTATACGTATGTACCCAATGTGGAAACCGATGCCTAGATCATCTGCAATATTGTTGACTGGATCAGTGACAGCATCGTCGGCTTCTGTCATACTGGcaattcatGTTGTTGGATCTTCCTATTACTTGTTATCAGTCGAATCCGTGCTTCGCTGCTGGAAAGGAACGTTGAAGAATTCTAAATTGTACAATGCTGCCATCTCTGATGATGTTTTCTTGAGCTGTGGACAACATAAACAAACAATTGTTTCACTTCTCAATACTTCTTGTCTTTTTATTGATGCTGATGAAATGAAAGATCCAACATCCTTCGATTTTGGAATATTTAAAGAAGCTCTATCGTCTCATGTGGTACAATCAAGTACCAAGTTTCTTCGTAAGTTCTTTTACTGCCTCTGGTGGGGTTTGCGCAATATCAGTTCTCTTGGCTCAAATCTCCAGACAAGCACTAATATTTGGGAATTACTTTTCGCATTCTTCATCTCCGTCTtcggtttattttttttcgcggtaattattgcaaatatccagagATATCTGCAATCTAGAATTGTTAGAGAAGAAGAGATGATGGAGAAATCCCAGGCCATAGAACGGTGGATGTCCCACCGCATGCTACCTTATTCTTTAAGGAAAAGCATTAGACAGCATGAACGTTACAAATGGAAAGACAAACTGAGTGTTGATGAGGAAACCTTAATCCACGACCTTCCTGAAGCTCTCAGAACAGATATAAAGCGTCACATTTGCTTGGCCTTGTTTAGAAAGGTGCCAATGTTTGaagaaatggacgaacatttGTTGGATGCAATCAGGAAAATGCAGCACACTTTCCgGTTCTACTCCATGCAATGGAGGACGTGGGCTGCCTGTTATATACAAAAAGCTTGGCGTTCCTACTGGAAAAAGAAGATGGAGAGGTCTTTATTTGAAGCAGAAGCCAGGCTACCAGATGCTCCTGCAGAAGTAGGGTCACCAAGTGTTAGTACCACAGTATATGAGTCAAGGTTTCCTTCCAATGCCTCCGGATCCATGAGACAAAGGGAAAAACCTAACAACACTAGTTGCGTGAATGACTATTG 1568 0.3909 MNIRRLKRLRNEIFDPWEPLFRRWNKIFVCTCLIAVFVDLLFFYIPKVNEQEKCLDWDGGLKITACVLRSIFDLIYVLRIIFQFRTGFIASSSRILGSGELVADSVTTVKKYLFGYFVVDILSIIPVPQVVVLGNIQILKSLFPVDTINLLKIITLVQFYPRVIRMYPMWKPMPRSSAILLTGSVTASSASVILAIHVVGSSYYLLSVESVLRCWKGTLKNSKLYNAAISDDVFLSCGQHKQTIVSLLNTSCLFIDADEMKDPTSFDFGIFKEALSSHVVQSSTKFLRKFFYCLWWGLRNISSLGSNLQTSTNIWELLFAFFISVFGLFFFAVIIANIQRYLQSRIVREEEMMEKSQAIERWMSHRMLPYSLRKSIRQHERYKWKDKLSVDEETLIHDLPEALRTDIKRHICLALFRKVPMFEEMDEHLLDAIRKMQHTFRFYSMQWRTWAACYIQKAWRSYWKKKMERSLFEAEARLPDAPAEVGSPSVSTTVYESRFPSNASGSMRQREKPNNTSCVNDY 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02030 522 MobiDBLite consensus disorder prediction 500 522 - -
Bva02g02030 522 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 435 515 - -
Bva02g02030 522 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 8 433 - -
Bva02g02030 522 SUPERFAMILY cAMP-binding domain-like 349 442 IPR018490 -
Bva02g02030 522 SUPERFAMILY Voltage-gated potassium channels 16 348 - -
Bva02g02030 522 Pfam Ion transport protein 24 345 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva02g02030 522 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 435 515 - -
Bva02g02030 522 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 433 - -
Bva02g02030 522 Gene3D - 25 341 - -
Bva02g02030 522 Gene3D Helix hairpin bin 342 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02030 Bva-Chr2 21263800 21267744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02030 434 514 Ion Channels AT5G53130 51.111 2.64e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02030 K05391 - gmx:100797784 454.907