Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02025 ATGGGTTACATAGAACAAGTTTTGGCAACTTCAAACATGGAAGTAATCCCAGAAGCGAAATTGAATGAGAATGGAGAGCCAATTCTCTATGCTTATTCTTCCTGGCTGAAAGAGCATCCCTCTGCCTTGGAACATTTTGAGGAAATGATGAGCGTTGCTGCAGGGAAAGAGATCGTGGTGTTTTTGGACTATGATGGAACACTCTCGCCGATTGTAGATGACCCTGATCAGGCTCACATGAGTGATGCTATGCGCGAAGCAGTAAGCCAAATTGCTCGTTATTTTCAAACTGCCATTGTCAGTGGAAGGAGCCGCAACAAGGTGATTGAATTTGTCAAGCTGGAGAATGTTTATTATGTTGGAAGTCATGGGATGGATATATATACCCCATTAGGGTCTTCAAAGTATGGAGACGACCAAAACCAGACAAAGATCACCGATGAAAAGGGTAATGAACTGATTCACTTCCATCCTGCACGTGAATATTCGGTTGAGATCAACAAGATACTCGAggatttgaaaagaaaaaccagaagCATCAAGGGCTCCATGGTAGAAGATAATAATTTCAGTATCAGTGTACACTACCGGCGCGTGAAGAATGAAGAGGATGTTGGCATCCTCAAACAGACTGTGCAGTCCACTATGAAAGCTTACCCTGATTTTGTCATATCAGGAGGAAAAAAGGTTATTGAGATAAGCCCGAATGTTAAGTGGGATAAAGGTCATGCTTTGAAGTATTTGCTTGACGCTCTTTGTTCTAGCAGCAATCAAAATGTTCCTCTGTACATTGGGGATGACAGAACCGATGAAGATGCTTTTAAgGCTATAGGAGAAATTGGACAAGGATTTCCAATCATCGTTTCTTCGATTGCTAAGGAGACCAAAGCTTCATATTCTCTACGAGACACTGTTGAAGTGATGTCTTTCTTGCTACTTCtagcaaaatggaagaagagcTCCTTAGGGAAAAGCCAAACCTTGACTTG 989 0.4024 MGYIEQVLATSNMEVIPEAKLNENGEPILYAYSSWLKEHPSALEHFEEMMSVAAGKEIVVFLDYDGTLSPIVDDPDQAHMSDAMREAVSQIARYFQTAIVSGRSRNKVIEFVKLENVYYVGSHGMDIYTPLGSSKYGDDQNQTKITDEKGNELIHFHPAREYSVEINKILEDLKRKTRSIKGSMVEDNNFSISVHYRRVKNEEDVGILKQTVQSTMKAYPDFVISGGKKVIEISPNVKWDKGHALKYLLDALCSSSNQNVPLYIGDDRTDEDAFKAIGEIGQGFPIIVSSIAKETKASYSLRDTVEVMSFLLLLAKWKKSSLGKSQTLT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02025 329 TIGRFAM T6PP: trehalose-phosphatase 56 315 IPR003337 GO:0003824|GO:0005992
Bva02g02025 329 Gene3D - 58 143 IPR023214 -
Bva02g02025 329 Gene3D - 162 327 IPR023214 -
Bva02g02025 329 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 18 325 - -
Bva02g02025 329 Pfam Trehalose-phosphatase 61 303 IPR003337 GO:0003824|GO:0005992
Bva02g02025 329 SUPERFAMILY HAD-like 59 317 IPR036412 -
Bva02g02025 329 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 18 325 IPR044651 GO:0004805|GO:0005992
Bva02g02025 329 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 60 280 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02025 Bva-Chr2 21229857 21231940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02025 55 321 Trehalose Biosynthesis Gene Families AT1G06410 24.916 1.37e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02025 K01087 - gmx:100799466 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02025 02 21229857 21231940 Bva02g02025 02 21229857 21231940 ECH