Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02024 ATGCACGCAAAGCTCTTATCACAGTTCCGTGTCCTCAACGCTTCTTCCTCCTTCACCGCCCATTTCTCTTCCATGAAGCTTGGGGCTTCAATTAAGACTTCCAATTCCATGGCCGTGCCCATTTTCTCTCGCGTCTTCCCCTTTAGGCTCAAATACTTGGGTTTGCAGTCTCAATCTCTTCGAAATGAGCAATGTGTTCGCAAACTATCGACACGGTCGTTTCCGGGTAGACCCGGGTCGAGGTCCGAGTTCAGCCGGGGAAACCGAGATATAAGTGTGGTTGGTTCTTCCAAGAGTCTTATCGAGGACGAGGCTGAACTCAGTAATTGGGTTGATGATTTAAGGACCGATTCTCACCGTGGTCGACTAACTAGCGAAGAGGAGGAGTCGGATGGAGGCAGAGGCCGCAGTGGAGGAAAGAGTAGAGGGTCTTCGCTGATGAAGAAAAGGAGGGAGGGCGGAGCTGACAGATTCAGTGAGTCAACCAGGAGGAGAACTCGTGATCCAGTTGACTCGTTCCCCAGGAATTCACGTATAAGTAGGGGATTATTGAATGATGATGgtgaggaggaggaggaggaagattTCCGCTCCTGGAGAAAAAATGTGGGGCCTAGAGGAGGTGGAAATATGAAATCTTATTTGGGGAAGAGAAAAGGTGAGGACTTGAGGAAAGGAGGAAGAGAATCGAGGAGAAGGTCACAATTGATTAGTGAGGATGATGTTGATGAAGATGAGGAGTCGAACAAGTTCGTGGACGTTGGAGATTTGCTAAGTGAAGAAGATAGTGATGTTGAAGGTTCTGAGGATGATGATTTATTGAAGAAGGGTAGAAATCGttcatttggttttgaaaagGAATTGAATATGAGCAGCATGCCAAGAGACTCACCTTCACCAGGGAGATCTGATTCTTATTTAAGTGAGACCAGATTCGACCAATGTTCAATCTCTCCATTATCATTAAAAGGAATCAAAGATGCTGGATTTGAGAAAATGACTGTTGTTCAAGAGGCAACTCTTCCAGTAATTCTTAGAGGTAAGGATGTCCTTGCCAAAGCTAAAACGGGCACAGGAAAAACTGTAGCCTTTTTGCTTCCATCAATTGAAGTTGTTTCAAAGTCTCCTTCAATTGATCGTGATCAAAAGCGACCACCAATTCTTGTGCTTGTTATATGCCCAACTCGAGAACTTGCAATTCAAGCTGCTGCAGAAGCCAATAAATTGCTCAGGTATCATCCTACTATTGGTTGTCAAGTTGTGATTGGGGGGACAAGACTTGCTTTAGAACAGAAACGCATGCAAACCAACCCTTGCCAGATCCTTGTTGCAACACCTGGAAGGCTGAGAGACCATACTGAGAATACTCCTGGTTTTGCAACTAGGCTGATGGGTGTTAAAGTCCTTGTTCTTGATGAAGCTGATCATTTGCTAGACATGGGTTTCCGCAAAGACATTGAGAAGATAATTGCTGCAGTTCCTAAACAACGGCAGACACTTTTGTTTTCTGCTACCGTTCCAGAAGAGGTCCGTCAAATCTCTCATATTGCTTTGAGAAGAGAtcatgaatttattaatactGTTCAAGAGGGTAGCGAGGAAACACATGCACAGGTTGGACAGACGTATTTAGTTGCCCCATTGGACAAACATTTCTCCCTACTCTATGCTCTTCTAAAGGAGCATATTGCAGATGATGTTGACTATAAGGTTCTCGTTTTCTGCACAACAGCTATGGTCACAAGACTTGTTGCTGACCTTCTTGGTGAGCTGAACTTGAACATCAGAGAAATCCATTCTAGAAAGTCTCAGAGCTACAGAACCAAGGTCTCCGAGGAATTTCGGAAGTCAAAGGGTCTCATTCTCGTTACGTCTGACGTATCTGCACGTGGAGTCGATTACCCAGACGTCACGCTTGTTGTACAGGTCGGCTTGCCAGCTGAGAGGGAACAGTATATACATAGGCTCGGTAGAACAGGGCGGAAAGGTAAAGAAGGGCAGGGCATATTGTTACTGGCTCCTTGGGAAGAATTCTTTTTATCCACAGTAAAGGATTTGCCAATTACCAAAGCTCCAGTACCTCCAATTGACCCTGACACGAAGAGAAAGGTGGAAAAAGCTCTATCTCTAGTGGAGATGAAGACCAAGGAATCAGCGTATCAGGCTTGGCTTGGTTACTACAATTCCAACAAAAAAGTGGGGCGAGACAAATATAGGCTTGTGGAGCTTGCAAATGAGTTCAGCAGAAGTATGGGACTTGATAATCCCCCTGCCATTCCCAAGCTTGTTCTTGGCAAGATGGGTCTCAGAAATATTCCTGGTTTACGTACTAAATA 2336 0.4405 MHAKLLSQFRVLNASSSFTAHFSSMKLGASIKTSNSMAVPIFSRVFPFRLKYLGLQSQSLRNEQCVRKLSTRSFPGRPGSRSEFSRGNRDISVVGSSKSLIEDEAELSNWVDDLRTDSHRGRLTSEEEESDGGRGRSGGKSRGSSLMKKRREGGADRFSESTRRRTRDPVDSFPRNSRISRGLLNDDGEEEEEEDFRSWRKNVGPRGGGNMKSYLGKRKGEDLRKGGRESRRRSQLISEDDVDEDEESNKFVDVGDLLSEEDSDVEGSEDDDLLKKGRNRSFGFEKELNMSSMPRDSPSPGRSDSYLSETRFDQCSISPLSLKGIKDAGFEKMTVVQEATLPVILRGKDVLAKAKTGTGKTVAFLLPSIEVVSKSPSIDRDQKRPPILVLVICPTRELAIQAAAEANKLLRYHPTIGCQVVIGGTRLALEQKRMQTNPCQILVATPGRLRDHTENTPGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATVPEEVRQISHIALRRDHEFINTVQEGSEETHAQVGQTYLVAPLDKHFSLLYALLKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNIREIHSRKSQSYRTKVSEEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPAEREQYIHRLGRTGRKGKEGQGILLLAPWEEFFLSTVKDLPITKAPVPPIDPDTKRKVEKALSLVEMKTKESAYQAWLGYYNSNKKVGRDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLRNIPGLRTK 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02024 778 PANTHER RNA HELICASE 274 776 - -
Bva02g02024 778 PANTHER RNA HELICASE 74 136 - -
Bva02g02024 778 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 341 524 IPR014001 -
Bva02g02024 778 MobiDBLite consensus disorder prediction 145 174 - -
Bva02g02024 778 Pfam Helicase conserved C-terminal domain 554 663 IPR001650 -
Bva02g02024 778 MobiDBLite consensus disorder prediction 215 239 - -
Bva02g02024 778 Gene3D - 533 756 IPR027417 -
Bva02g02024 778 MobiDBLite consensus disorder prediction 292 307 - -
Bva02g02024 778 MobiDBLite consensus disorder prediction 121 136 - -
Bva02g02024 778 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 274 776 - -
Bva02g02024 778 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 310 338 IPR014014 GO:0003724
Bva02g02024 778 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 558 709 IPR001650 -
Bva02g02024 778 CDD DEADc_MSS116 317 526 - -
Bva02g02024 778 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 74 136 - -
Bva02g02024 778 SMART ultradead3 329 535 IPR014001 -
Bva02g02024 778 CDD SF2_C_DEAD 541 672 - -
Bva02g02024 778 MobiDBLite consensus disorder prediction 121 307 - -
Bva02g02024 778 Gene3D - 283 525 IPR027417 -
Bva02g02024 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 679 IPR027417 -
Bva02g02024 778 SMART helicmild6 582 663 IPR001650 -
Bva02g02024 778 MobiDBLite consensus disorder prediction 269 283 - -
Bva02g02024 778 Pfam DEAD/DEAH box helicase 335 512 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02024 Bva-Chr2 21223929 21228517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02024 310 691 Eukaryotic Initiation Factors Gene Family AT3G19760 28.389 5.48e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02024 - - zju:107423621 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02024 02 21223929 21228517 Bva02g02024 02 21223929 21228517 ECH