Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02014 atGGGAGAGACCATGAACTGCGACCAAGTTACTCTCATCGATGAGCTAATCCAAGGGAAGGAGCTAGCAAAGCAGCTCTTTGGTCTTATCTCtacttctccttcttctcatGAAACAAATGAATTCTTAGTTGAGAAAATACTTTCTTCCTATGAGAAAGCACTGGAGATGCTGAAATGGGAAGCTAACATGGAGAAGCTTAACACCACCATTGACGCCAAACTGGATTCCCATTGCTCTTTCGCTAATGGGAGCCCCAGCAGTGAGGCTTCAGACCAAGACTTCAAGCACAAAGACGTCTTCAAGAAAAGAAAGACCATGCCAAGATGGACAGAGCAAGTGAAGGTTTGCTCTGGAACTGGGCTTGAAGGGTCTCTGGATGATGGTTACAGCTGGAGGAAATATGGCCAGAAGGATATTCTTGGTTCAAAATTTCCAAGAGGATATTACAGATGCACTCATAAAAATGTACGAGGATGTTTGGCCACAAAACAAGTTCAAAGGTGTGACGATGACCCATCAATACTTGAAGTAACCTATAGAGGAAGACATACATGCACCCAATCATCTTATCCAAACAAGGCTTTCccatcaaaaataaagatggaATTGGTAGAAAATAAAGTTCTTAACCACCAAGAAACACAAGcacaagaagagaaaatgggaCAGACACCAGAATCGTTTTTCTCTTTGGGAGCAGATCTTGAGGTCAAAACAGAAGACATAGACAACATGAAGCACATATTTCCATCATTTGGGCTTGCTTCTTCGTCAATAGGATATGAGAAAGACGACAACAGCATATTCAATGAGACTATGATGGAAAATCATTTCATGACAAACTATTCTCCTGCATTCATTTCACCAGCAACTTCAGAATCAAACATCTTCTTCCAACTGGGAGAACTTGGCCAAAGTGTGCAAACTTCAGAATCTGATATCACAGAGATAATTTCTGCCCCAAATTCAGTCACCAATTCCCCAATCATGGATTTGGATATGTTACTTGATAAAGGGGATTTCGACTCGCATTTCCCTTTCAATTCCCCTGAATTTCTTTCTGTATA 1070 0.3897 MGETMNCDQVTLIDELIQGKELAKQLFGLISTSPSSHETNEFLVEKILSSYEKALEMLKWEANMEKLNTTIDAKLDSHCSFANGSPSSEASDQDFKHKDVFKKRKTMPRWTEQVKVCSGTGLEGSLDDGYSWRKYGQKDILGSKFPRGYYRCTHKNVRGCLATKQVQRCDDDPSILEVTYRGRHTCTQSSYPNKAFPSKIKMELVENKVLNHQETQAQEEKMGQTPESFFSLGADLEVKTEDIDNMKHIFPSFGLASSSIGYEKDDNSIFNETMMENHFMTNYSPAFISPATSESNIFFQLGELGQSVQTSESDITEIISAPNSVTNSPIMDLDMLLDKGDFDSHFPFNSPEFLSV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02014 356 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 347 IPR044810 GO:0003700
Bva02g02014 356 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g02014 356 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g02014 356 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g02014 356 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 347 - -
Bva02g02014 356 Gene3D WRKY domain 114 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g02014 356 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02014 Bva-Chr2 21166103 21168542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02014 13 248 WRKY Transcription Factor Family AT5G24110 39.916 6.00e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva02g02014 WRKY 2.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02014 - - aprc:113849885 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02014 02 21166103 21168542 Bva12g01983 12 15713752 15715770 ECH
Bva02g02014 02 21166103 21168542 Bva02g02014 02 21166103 21168542 ECH
Bva02g02014 02 21166103 21168542 Bva08g01907 08 12813091 12815407 ECH
Bva08g00062 08 338531 340270 Bva02g02014 02 21166103 21168542 ECH
Bva11g02207 11 17936815 17938564 Bva02g02014 02 21166103 21168542 ECH