Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01992 ATGGGAAACAGTGAGGAGGGGAAGCCCACCAAGGCTGAAAAACCATCTTCACCTGTCACAACGGATCAAGCCAATCAGACCAACCAGACCAATATTCACGTCTATCCTGATTGGGCAACTATGCAGGCATATTACGGGACAAGAGTCACCATGCCACCGTATTACAACTCAGCTGTGCCCTCTGGTCACGCTCCTCACCCATACATGTGGGGGCCTCCACAGCCTATGATGCCACCCTATGGAGCACCTTACGCAGCAATCTATTCACATGGAGGTGTTTATGCACACCCTGCCGTTCCTATTGCTGGAACTCCTTTAAGCATGGAGACACCAACCAAATCATCTGGAAATCCTGATCAgggtttaatgaaaaaattgaaagggtTTGATGGTCTTGCCATGTCAATAGGCAACGGCAATGCTGAGAGTGCTGAGCGTGGAGCTGAAAATGGATTGTCACATAGCAGCATGGATACCGAGGGTTCCACTGATGGAAGTGTTGGCAATACTGCTGGGGCTAATCaaataagaaggaaaagaagccGTGAGGGTACACCAAGCACTGATGGAGATGGGAAAACTGAGATACATGCCAGCCCAGTTTCCAAAGAGGCTGCAACTGCGAATAAGGTGATGTCAGTTACCCCTGGCAGTGTTGGAGGAAAACTGGTTGGACCTGTAGTTACTTCAGGTATGACCACACGACTGGAGCTGATGAACCCTCCTAAGACAGGTCCTGCAAGTGTCCCACAACCTTGTGCAGTATTGCCATCTGAGCCCTGGTTGCAGAATGAACGTGAGCTGAAAAGGGAAAGGAGGAAACAATCAAATCGTGAATCCGCTAGAAGGTCCAGGCTAAGAAAGCAGGCTGAGACGGAAGAACTTGCAAGAAAAGTTGAATCATTGACTGCTGAGAATGTGGCGCTGAAGTCAGAAATGAATCGATTGACTGAAAGCTCTGGAAAACTGAGGGCGGAAAATGGAACATTAATGgaaaaagtgaaaaaagcaCAAGCGGGACAAACGGAAGAAATGGTTTTGAACAGCATTGATAGCAAGAGAGCTACACCTGTGAGCACTGAAAACTTACTGTCAAGAGTTAATAATTCCAGTTCTGATGATAGAACTGCCGAGGATGAGCATGATTTTAGTGACAACAAACCAAGCTCTGGCACAAAGTTGCATCAACTACTGGATACAAGTCCTAGAGCTGATGCTGTAGCAGCTGGCTG 1232 0.4562 MGNSEEGKPTKAEKPSSPVTTDQANQTNQTNIHVYPDWATMQAYYGTRVTMPPYYNSAVPSGHAPHPYMWGPPQPMMPPYGAPYAAIYSHGGVYAHPAVPIAGTPLSMETPTKSSGNPDQGLMKKLKGFDGLAMSIGNGNAESAERGAENGLSHSSMDTEGSTDGSVGNTAGANQIRRKRSREGTPSTDGDGKTEIHASPVSKEAATANKVMSVTPGSVGGKLVGPVVTSGMTTRLELMNPPKTGPASVPQPCAVLPSEPWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENVALKSEMNRLTESSGKLRAENGTLMEKVKKAQAGQTEEMVLNSIDSKRATPVSTENLLSRVNNSSSDDRTAEDEHDFSDNKPSSGTKLHQLLDTSPRADAVAAG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01992 410 Coils Coil 285 319 - -
Bva02g01992 410 MobiDBLite consensus disorder prediction 263 300 - -
Bva02g01992 410 SMART brlzneu 265 329 IPR004827 GO:0003700|GO:0006355
Bva02g01992 410 MobiDBLite consensus disorder prediction 307 324 - -
Bva02g01992 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 272 287 IPR004827 GO:0003700|GO:0006355
Bva02g01992 410 MobiDBLite consensus disorder prediction 342 371 - -
Bva02g01992 410 MobiDBLite consensus disorder prediction 14 31 - -
Bva02g01992 410 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Bva02g01992 410 MobiDBLite consensus disorder prediction 137 410 - -
Bva02g01992 410 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 410 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bva02g01992 410 MobiDBLite consensus disorder prediction 176 190 - -
Bva02g01992 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 267 330 IPR004827 GO:0003700|GO:0006355
Bva02g01992 410 Pfam Disordered region downstream of MFMR 119 250 - -
Bva02g01992 410 MobiDBLite consensus disorder prediction 372 388 - -
Bva02g01992 410 MobiDBLite consensus disorder prediction 1 31 - -
Bva02g01992 410 Pfam bZIP transcription factor 265 327 IPR004827 GO:0003700|GO:0006355
Bva02g01992 410 PANTHER G-BOX-BINDING FACTOR 3 1 410 - -
Bva02g01992 410 Gene3D - 268 322 - -
Bva02g01992 410 SUPERFAMILY Leucine zipper domain 268 323 IPR046347 GO:0003700|GO:0006355
Bva02g01992 410 CDD bZIP_plant_GBF1 270 318 IPR045314 GO:0003700|GO:0006355
Bva02g01992 410 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01992 Bva-Chr2 21047965 21053485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01992 1 410 bZIP Transcription Factor Family AT2G46270 51.276 6.48e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva02g01992 MFMR_assoc 8.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01992 K09060 - gmx:778133 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01992 02 21047965 21053485 Bva02g01992 02 21047965 21053485 ECH