Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01963 ATGGTGTCTGTGAACCCAAACCCAGCTCAGGGGTTTTACTTCTTTGATCCCATGAATATGGGTCTACCCGGCGTTAATCCTCTACCACCGCCAACGGCATCTGCTTCGTCCAACGATACGGCTTCATCGACGACGGCAACGAATGCCACAACCAATACGGCGTCCTACGCGGAGGATCCGAATAAGAAGATCCGAAAACCATATACGATTACCAAGTCTCGAGAGAGCTGGACAGAGCAGGAGCACGATAAGTTTCTCGAAGCTCTACAATTATTTGATCGTGACTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAAACTGTTATCCAGATCCGAAGTCATGCTCAGAAGTATTTTCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCTCCTCCTCGACCAAAGAGAAAAGCTGCTCATCCATACCCACAAAAAGCCCCCAAAAATACTCCTGCTCCGTCTCAAGTTACTGGACCAGTACAACCTCCATCTGCTTTCATCGAACCTGCTTACATTTATCGGCCAGACTCGTCATCTGTTCTTGGAACTCCAGTTACCAGTATGCCTGTATCATCGTGGAGTTATAATGCTGTTCATCCAGTCAGTGTGCCACAAGTGAATAAAGATGACATGGGATTGGCTAGTCAGTCTGTTCCTCTTAATTGTTGCTATAGCAGTAGTAATGAGATCACACCCAGGGCTTGGCCAAGTAGCAAAGGGGTAGATCGAAGGGATCAGGCCCATCAGAGTAAGCCAATGAAAGTAATGCCGGATTTTGCACAAGTCTACAGCTTCATTGGCAGCGTATTTGATCCGAATACAACTGGTCACCTACAGAGACTTAAGCAAATGGACCCAATAAATTTGGAGACAGTATTGCTTTTAATGAGAAATCTTTCCATCAATTTAACGAGTCCTGAGTTTGAGAATCATAGGAGGTTGCTCTCAACATATGATGCGAAATCTGGTAGTCTTTGCAGCAATCCGCTGACCGAAAAATCCGAGAGTGCTGTTCTGTCTGCCTA 1031 0.453 MVSVNPNPAQGFYFFDPMNMGLPGVNPLPPPTASASSNDTASSTTATNATTNTASYAEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNTPAPSQVTGPVQPPSAFIEPAYIYRPDSSSVLGTPVTSMPVSSWSYNAVHPVSVPQVNKDDMGLASQSVPLNCCYSSSNEITPRAWPSSKGVDRRDQAHQSKPMKVMPDFAQVYSFIGSVFDPNTTGHLQRLKQMDPINLETVLLLMRNLSINLTSPEFENHRRLLSTYDAKSGSLCSNPLTEKSESAVLSA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01963 343 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Bva02g01963 343 SMART sant 73 121 IPR001005 -
Bva02g01963 343 PANTHER MYB TRANSCRIPTION FACTOR 2 332 - -
Bva02g01963 343 MobiDBLite consensus disorder prediction 123 161 - -
Bva02g01963 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Bva02g01963 343 CDD SANT 76 119 IPR001005 -
Bva02g01963 343 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
Bva02g01963 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 121 IPR006447 GO:0003677
Bva02g01963 343 Gene3D - 77 124 - -
Bva02g01963 343 MobiDBLite consensus disorder prediction 25 60 - -
Bva02g01963 343 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Bva02g01963 343 PANTHER SWI/SNF COMPLEX-RELATED 2 332 - -
Bva02g01963 343 ProSiteProfiles SANT domain profile. 72 125 IPR017884 -
Bva02g01963 343 MobiDBLite consensus disorder prediction 31 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01963 Bva-Chr2 20895348 20899412 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva02g01963 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01963 - - adu:107472769 490.345