Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01956 ATGGAGGACGATTGGGATCTGCACGCCGTGGTCAGAGGCTGCGCTTCCATCACCACCacttcctcctcctcttcctccACAGTCACCACCGCCACCAACACAGCTGCATGTTCTGTATCTTCCTCTGGTTTTGGTGCTTGTTATCAGTCTCCTGCTGCTGCTTCCTTCGGCTTCTCTGTTTTTGGTAGTGAACAAGTAGGCCAAGTTCCGACAGTTTCAGACCCTTTTGAGGCAAGAAGTTCCATTGAAGAATTGCACGAGCTTTATAAGCCTTTCTTCCCCAAATCACACCCTCCCTCTTTGCAAACTTCTCCTCTTTCCCccctttcttccttctccGTTTCCTCTGCACCTAAAGCTGCTCAAACGCAGCAAAAGCAGCAGCAACAGCCTGGTAAGCAGTCTCATGTTGGCTCTGCTACCGCTTCAAGATCAAAAAGAAGGAAGAACCAGCTCAAGAAAGTATGTCAAGTTCCTGCTGAGTCCCTCTCTTCTGACATTTGGGCATGGAGGAAATATGGTCAAAAACCCATTAAAGGCTCTCCATATCCAAGGGGATATTACCGATGTAGCAGCTCAAAAGGTTGCTTGGCTAGGAAACAGGTAGAGAGGAATAGATCCGACCCAACAATGTTCATAGTGACCTATACGGCGGAGCACAACCACCCTGCTCCAACTCATCGGAATTCTCTTGCGGGCTCTACCCGGCAGAAGCCCTTAACCACTCAATCAGGCACAGCCGGAGACTCTGAAAAACCCCTGACAAAACCCATTTCTCCGGCCTGTTCCGGGGTGGAGGAGGAACTTGCAGCTCAGAGTGCAAAGTCAGAGAGCAAGGAAGAAAAGGAGGACTTAATGGATgacgaagaagaagatgaatttggGATATCAGATATGGCCATATCGGATGATTTCTTTGAAGGATTAGATGAATTCACAAGATCATCTCCACCGCCTGCGGGGGCCGGCGATTGCTTCATTGACCCTTTTTCCGCTGGAATTGCTCTGCCTGCTTGGGTGGCCAATAATGCAACAACTGCCGCTAGTGGCAGCTG 1055 0.4692 MEDDWDLHAVVRGCASITTTSSSSSSTVTTATNTAACSVSSSGFGACYQSPAAASFGFSVFGSEQVGQVPTVSDPFEARSSIEELHELYKPFFPKSHPPSLQTSPLSPLSSFSVSSAPKAAQTQQKQQQQPGKQSHVGSATASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLTTQSGTAGDSEKPLTKPISPACSGVEEELAAQSAKSESKEEKEDLMDDEEEDEFGISDMAISDDFFEGLDEFTRSSPPPAGAGDCFIDPFSAGIALPAWVANNATTAASGS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01956 351 Gene3D WRKY domain 148 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g01956 351 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g01956 351 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 338 - -
Bva02g01956 351 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 338 IPR044810 GO:0003700
Bva02g01956 351 MobiDBLite consensus disorder prediction 220 293 - -
Bva02g01956 351 Coils Coil 271 291 - -
Bva02g01956 351 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01956 351 MobiDBLite consensus disorder prediction 99 157 - -
Bva02g01956 351 MobiDBLite consensus disorder prediction 99 141 - -
Bva02g01956 351 MobiDBLite consensus disorder prediction 222 250 - -
Bva02g01956 351 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01956 351 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01956 Bva-Chr2 20837166 20838817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01956 1 350 WRKY Transcription Factor Family AT4G01250 46.409 2.81e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva02g01956 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01956 K13425 - gmx:100798084 385.571