Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01949 ATGGAAAGCCAAGACCCACCGAACCCATCACCACTGCCACCACCGCCGTTACTATTGCCGCCTCAAAACCCTTCCTTGCTTCTCACGCAGCCATTGCCGGCCTCATCGATGTTGCAACCTCCTTTGGACCTTCAAGGACTGCCGGATATTGACTGGGTTAGCATTTTCTCTGGCCAAAACGGCTTGCTAGCAAATAAGCCAATAATGGACtgttctgcttcttcttctttaatgGCTCAGAACGGAGTTGAGGACAAGAAGGGCAatgaggagaaaagaaaaggtggtAGAATGAAGAAGACAACTCGTCCCAGGTTTGAGTTTCAGACGAGAAGTGCAGATGATATTCTTGACGATGGATATCGTTGGAGAAAATATGGACAGAAAGCTGTAAAGAATAGTATACATCCCAGAAGCTACTATCGGTGCACACATCACACGTGCAATGTGAAGAAACAGGTGCAAAGGTTGTCCAAAGACACGAGCATCGTGGTTACAACTTACGAAGGAATTCACAACCACCTATGTGAGAAGCTCATGGAAACCTTAACTCCTCTTCTCAAGCAAATGCAGTTTCTCTCTGGGACGTTTTCTAGCTA 599 0.4341 MESQDPPNPSPLPPPPLLLPPQNPSLLLTQPLPASSMLQPPLDLQGLPDIDWVSIFSGQNGLLANKPIMDCSASSSLMAQNGVEDKKGNEEKRKGGRMKKTTRPRFEFQTRSADDILDDGYRWRKYGQKAVKNSIHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHLCEKLMETLTPLLKQMQFLSGTFSS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01949 199 SMART WRKY_cls 117 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01949 199 ProSiteProfiles WRKY domain profile. 112 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01949 199 MobiDBLite consensus disorder prediction 80 102 - -
Bva02g01949 199 Gene3D WRKY domain 102 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g01949 199 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 45 192 - -
Bva02g01949 199 SUPERFAMILY WRKY DNA-binding domain 110 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g01949 199 MobiDBLite consensus disorder prediction 84 102 - -
Bva02g01949 199 MobiDBLite consensus disorder prediction 1 22 - -
Bva02g01949 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 192 IPR044810 GO:0003700
Bva02g01949 199 Pfam WRKY DNA -binding domain 118 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01949 199 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01949 Bva-Chr2 20809508 20810731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01949 86 199 WRKY Transcription Factor Family AT5G41570 70.175 7.31e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva02g01949 WRKY 6.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01949 - - pop:7492733 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01949 02 20809508 20810731 Bva02g01949 02 20809508 20810731 ECH