Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01927 ATGACTCTGAGAAATTTGATTACCAGGGTAGACGCCATCTGCACCAAGTACGACAAGTACGACGTCGacaagcaaaaggaaaaggaacaaAACCTTAAAAATGTCTCAGGGACCGATGCATTTGCTCGTCTATACGGCGTCGTTGAAGCCGACGTCGACGCTACCCAACagAAATCAGTGGCTGCTGCAAACGAGAAGAACAGGGCAGTAGCTGTTGCTTTGAATGCGGAGATTAGACGAGCAAAAGGTCGCTTATTGGAGGAGATTCCCAAACTGCAGAGGCTCGCTCTTAAAAGGGGAAAAGGGGTTTCAAATGAAGAGATGAATGATCGAAATGATTTGGTTTCTGATTTAAAAGAGAGGATTGAGCGCATACCAGATGGAACAGCAGCTGGACTTCAACAAACAGGTGGCTGGGCAGCTTCTGCTTCCCATTCTGCCATTAAAATTGACCATATTTCAGAAGGGAAATTTCACAATGACTACTTTCAACGAACAGAGCAGGGAGATGGGTTCAGGCAGGAGTATGAAATGCGCAAAATAAAGCAGGATCAAGATTTAGATGTCATAGCCGAAGGATTGCACACGTTGAAGAACATGGCGCATGACGTGAACGAGGAATTGGACAGACAAGCTCCTTTGATAGACGAAATAGATGATAAAGTTGAAAAGGCAAATTCTGACCTTAAAAACACTAATGTGAGGCTCAGGGATACTGTGACTAAGcTAAGGTCGAGCCGCAACTTCTGCATTGACATCATCCTCTTGGTTATTATTTTAGGAATTGCTTCTTACTTATACAATGTTTTGAAATG 815 0.4233 MTLRNLITRVDAICTKYDKYDVDKQKEKEQNLKNVSGTDAFARLYGVVEADVDATQQKSVAAANEKNRAVAVALNAEIRRAKGRLLEEIPKLQRLALKRGKGVSNEEMNDRNDLVSDLKERIERIPDGTAAGLQQTGGWAASASHSAIKIDHISEGKFHNDYFQRTEQGDGFRQEYEMRKIKQDQDLDVIAEGLHTLKNMAHDVNEELDRQAPLIDEIDDKVEKANSDLKNTNVRLRDTVTKLRSSRNFCIDIILLVIILGIASYLYNVLK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01927 271 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 177 239 IPR000727 -
Bva02g01927 271 Pfam SNARE domain 214 263 IPR000727 -
Bva02g01927 271 Gene3D - 177 238 - -
Bva02g01927 271 SMART tSNARE_6 172 239 IPR000727 -
Bva02g01927 271 ProSitePatterns Syntaxin / epimorphin family signature. 183 222 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bva02g01927 271 Coils Coil 215 235 - -
Bva02g01927 271 SUPERFAMILY SNARE fusion complex 171 237 - -
Bva02g01927 271 CDD SNARE_Qc 182 237 - -
Bva02g01927 271 PANTHER SYNTAXIN-73 1 268 - -
Bva02g01927 271 PANTHER SYNTAXIN 1 268 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01927 Bva-Chr2 20719186 20721414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01927 1 271 SNARE and Associated Proteins AT3G09740 63.100 6.95e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01927 K08506 - tcc:18614108 368.237