Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01923 ATGAGTATGAGAGAAGGAAATGAGTGGAGCACGTATGGGTGTACTATGCTTGTGGACAAGAAAGTAGAACTTTACACACAGCTACCCAGCGTCAGCTTCCACAATTTCTCAGTTCCTTTCGTCCGAATTCAATTCTCCAACACAATTTCTTCCCATCCCTCTCTCGGTCTCTCGTCCAACGGTGAATGGACCAAAGGGTTGATTAAAAGACTGATTTTAGGAACATTTAGAAGCTGTGCAAGTGGAGTTCCTTATTGTCACTTTGGAAATAATGCATCCATCACTGTTAACTTTGTGTATTATTATTGCCCACGAGCTTTGGAAGAGCGCGAGTCTTTAACTGCTAATGATAGTAGGGCCACTTCTCTCACTGCTGGATTTCTGGTAGGTTTGAACCTGGAAGCATCCATACCTGATACTTTCCAGCCTCCTCCTACACCTTTGCCGTATGATGTGGTCTTGGGATGTCCAGCCTCAACAGATTCAGAGTCTGGCAGAGAAACAGTTAGTGGTAGTAgttttgaaactttaattacaTGTGAAGATCTTGAAGAATCAGAATGCAAAGCTCAAGTTAATTTTTTGCCTGTCTCTCCAAGAAAACTagaattatcaaaatcaaatgaatgtCATGTTTTAGTGACAGAAGAAGAGGATGTCTGTCCAATTTGTCTTGAAGaATACGATGTTGAGAATCCTAAAACTCTGACGAAGTGTGAACACCACTTTCACCTATCTTGCATTCTTGAATGGATGGAAAGAAGTGACTCCTGTCCTATATGTGATAAGGAGATGATATTTGACCAgagtttgaatta 818 0.3924 MSMREGNEWSTYGCTMLVDKKVELYTQLPSVSFHNFSVPFVRIQFSNTISSHPSLGLSSNGEWTKGLIKRLILGTFRSCASGVPYCHFGNNASITVNFVYYYCPRALEERESLTANDSRATSLTAGFLVGLNLEASIPDTFQPPPTPLPYDVVLGCPASTDSESGRETVSGSSFETLITCEDLEESECKAQVNFLPVSPRKLELSKSNECHVLVTEEEDVCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDKEMIFDQSLN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01923 272 SUPERFAMILY RING/U-box 215 268 - -
Bva02g01923 272 ProSiteProfiles Zinc finger RING-type profile. 221 262 IPR001841 -
Bva02g01923 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 92 271 - -
Bva02g01923 272 SMART ring_2 221 261 IPR001841 -
Bva02g01923 272 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 92 271 - -
Bva02g01923 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 271 IPR013083 -
Bva02g01923 272 Pfam Ring finger domain 220 261 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01923 Bva-Chr2 20699255 20702673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01923 86 272 C3H Transcription Factor Family AT4G00335 55.080 2.32e-67 206