Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01903 ATGGTTTCGCTTACAGCTATATATACTGTGGGCTCTGTGTTTCTGGTTACTGTCACTTTGGGATTAGCTGGAGACATAGTCCACCCTGACAATATTGCTCCAAAGAAACCTGGTTGTGATAGCAACTTTGTTTTGGTCAAAGTCCCTACTTGGATAGATGGGGTAGAAGACTGTGAGTATGTTGGTGTTGGTGCACGATTTGGTCCTACATTGGAATCTAAAGAAAAACACGCCAACCATACAAGAGTTGCCATGGCTGACCCTCCTGATTTTTGTACTAAGCCTAAGAATAAGCTCACTGGCGAGGTCATTTTGGTGCACCGAGGGAATTGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTCATTATTAACTATCGtacagAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACTGATCTTAGTATTGGAATACCCGCTGTCATGCTTCCACAAGATGCTGGCGAAGACTTGGAAAGTCATTTAGAAAATAACTCCACAgTTTCTGTGCAGTTATATTCTCCACTACGTCCATTGGTTGATGTGGCAGAGGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTATGTGCTTCTTATTGGTCTGCATGGACTGCCAAAGAAGCAGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATGTCTAAACATGGAAAATGCTGGTTCTAGTGGTTATGTGGAAATTAGTACTGCAGcagcaattttatttgttgttgttgcttcTTGTTTCTTAGTTATGCTTTACAAGCTAATGTCGTACTGGTTTGTTGAGGTTCTGGTGGTTCTATTTTGCATTGGTGGGGTAGAGGTTGATGTATTGAGTAAGTTACGGCATCCAAATCTTATCACACTTATAGGAGCCTGCCCAGAGTCTTGGACTCTTGTTTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGGCTCAGCTGCAAGAACAACACACCTCCATTATCATGGCAAACTCGAATTCGTATTGCCGCAGAACTCTGCTCTGCCcttatctttcttcattccagtAAACCTCACAGCGTAGTGCATGGTGACTTGAAACCTTCAAATGTTCTCCTTGTTAGCAAGCTTAGTGACTTTGGAATCTGCCGTATATTATCTCGTCATGAGTCCTCAAGTAACAATAGTACACTGTTCTGGAGAACTGACCCCAAGGGCACTTTTGCCTACATGGATCCCGAATTCCTTGCTTCAGGGGAACTCACTCCAAAGTCAGATGTTTATTCATTTGGAATCATATTACTAAGATTGTTGACTGGAGACCAGCTTTGGGAATA 1340 0.4082 MVSLTAIYTVGSVFLVTVTLGLAGDIVHPDNIAPKKPGCDSNFVLVKVPTWIDGVEDCEYVGVGARFGPTLESKEKHANHTRVAMADPPDFCTKPKNKLTGEVILVHRGNCSFTTKANIAEEAGASAILIINYRTELFKMVCEENETDLSIGIPAVMLPQDAGEDLESHLENNSTVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAKEAAIEQEKLLKDASDECLNMENAGSSGYVEISTAAAILFVVVASCFLVMLYKLMSYWFVEVLVVLFCIGGVEVDVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLSCKNNTPPLSWQTRIRIAAELCSALIFLHSSKPHSVVHGDLKPSNVLLVSKLSDFGICRILSRHESSSNNSTLFWRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGDQLWE 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01903 446 Pfam Signal peptide peptidase 243 288 IPR007369 GO:0004190|GO:0016021
Bva02g01903 446 Pfam PA domain 87 166 IPR003137 -
Bva02g01903 446 ProSiteProfiles Protein kinase domain profile. 230 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01903 446 Gene3D - 39 183 - -
Bva02g01903 446 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 7 287 - -
Bva02g01903 446 SUPERFAMILY Protein kinase-like (PK-like) 286 445 IPR011009 -
Bva02g01903 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Bva02g01903 446 PANTHER SIGNAL PEPTIDE PEPTIDASE 7 287 IPR007369 GO:0004190|GO:0016021
Bva02g01903 446 SUPERFAMILY PA domain 83 176 IPR046450 -
Bva02g01903 446 Coils Coil 218 238 - -
Bva02g01903 446 SMART serkin_6 271 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01903 446 Gene3D Transferase(Phosphotransferase) domain 1 321 446 - -
Bva02g01903 446 Gene3D Phosphorylase Kinase; domain 1 285 320 - -
Bva02g01903 446 Pfam Protein kinase domain 287 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01903 Bva-Chr2 20588846 20592508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01903 287 441 U-box Gene Family AT2G45910 71.698 3.03e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva02g01903 Pkinase 6.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01903 K09597 - gmx:100808921 503.056