Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01900 ATGGCAAAGAAATCCCAAAGACGCCCTGTGCGGTATGACAAAGATCAATCAGGCTGTATGTGGGGCTTTATTAGTATGTTCGATTTTCGCCATGCTCGCTCTACTAGGAAGTTGATTGCAGACAAGAGGCGCACCAGCAAGCATGCTGTGGGTTCTGTACATTCAAAGAATAAGTTTGAGATGCTGAGCAATTTGGGCGAAGATTTTCAAGGCAATCGTGACGGTGGAGAAAGCAAGAGACCAACTTTGAAATCTGATTCTAATAAGCCTAGTGTGAAGAAACTAATTGAAGAAGAGATGTTCATAGATCAGGACGCTATGAAGGACAAAGACAATGCTGAAGTAGAATCAAAAGAATCTAAATTAGGGCATGAAGACCCCTCAAAGATAGattccaaaagaaagaagaaatctcGCAAGAAAAGTCGTGATATGGACACTCATGATTTAAATTCAGATGAAATGGTGAAATTAGAACTCTCCCGTAATCAGCATTCAAGGCAACAGCCTAAAGATAATATTGATTTGGACAAGATAATGGAGGAATTTTGTCATTTGAGAAGTGCTTGTTCAGTGATGCATGACCACGATGGTGAAGTTCATGCACAATCAAACCAGAAGCATGTGATTGCTGAAAACAAAGCGAGAGATGCTATCCATCAACTTGTGAATCAGATGATATTTAATGGGAATGATCTGGCAGAAGCTAGAAAATTCCTTTGCTCCCATGAACTCATGGAAGCATTCCAGTTGATAAGTTCAGATAAAGAATTGTTTCTGAGACTTCTAGAAGACCCAAACTCGCttttattgaaatatgttCAAGAGTTGGGGAATGCTCAAGgtaaaaatgacaaagaatACAAGTCAGTTATTGGCTCCAATTTGTCTGAACAAGGGCCTGGTAGTCTGAGACAAACTAGGGAAGTTGTCAACCACAAACAGCGtaatttttttaggaaaaaggTTAAGTCTCAAGCCAAAAACCCAACAAACGGATATGTGGATAGTGAGAATAGGATTGTTATTTTGAAACCTGGGCCAATGGGCTTGCGAAATTCTGAGAGTGAGAATAATCTTGCATCATCAATAGATTCTCATGGTGATGTCCGTTACAAAGGTCCTTCCATGAGAGTTGGTTCACATTTTTCTCTTACGgagataaaaaagaagttaaaacaTGCTATGGGTAAGGAGAAACGTGGAAACCCTGATAAGGTCTTGGAGGAACTCCCTGCTGAACGAAAGAATATGGGGCAAGGCAGCAAATTCATTGGTAGAGACAATGTTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAGAAAATTGCAAGACCTATCTTTGATGCTAAGAAAGGAGACAAGAATGGCACATTTAAAGATTCTGAAGTGATACTGGAACACGAGAATGGTAATCCTAAAAAAAGGGTCcctaacatatatattgagGCCAAGAAACATTTGTGTGAGATTCTGGATGGTGATGAGGATATGGACTTCTCAAGTAGGCAGATCCCCAAATCCCTTGGGAGAATTCTGTCTCTTCCTGAGTACAACTTTTCTCCCCTCGGCAGTCCTGAAAGGGACTGGGAGAATAATTTTGTGACTGCACAGACAAGATTTTCTGGTGCAGAAAAATATAGGGAGGCCAATGAGGATATTTTGTCTCCCAGACAAGAAGCTCTTACTGATCGTCTGGATCAGGCAACAAAGAATCCAGAGAAGTCAAGCGTTTGTGATGAAATCTCTGATGATAAAGTACAAGGAATTAACTCACGGCTGAACTTTTCAGATGACTTTATTCATGATGAAAAGGGTGAAACAAGCAGTCATGTTGTTAGAGATGATATAATTGATGAAGGTAATGTAGAATCTACAAAAGAGATAAATGTTTTGGATTCTTCCTCTGAATTAGTTGGTTTGGTAGAAGGAAAGGACCAAAATATTGAGATCTCTGAAATTTCTGACTGTGCAAGACATTCTCAATGTTTGAATCAGGATGTATTAGACAAGAACCAATTGCCATCTTCTCCAGTGTCATCCCCTTCTCACTGTTCAATCACTAAGAAAATTGTAGAGCTAGAAAGTCGTGCTGATGTATCTGGGCGACCAAGTCCTGTGTCTGTTCTTGATACACCATTCCTAGAGGATGACATCAGCCATGGAAGCACCGGAATCCAACCTGttaaaGTACCAATACGACCACTACAAATTCAGTTTGAAGAGCATGATTCTTCACCtatgaatcaaattaaaagaggAAAGCATTGTGTTGAAGAAAATGTATTCATATTTGACTACATTCAAGCAATTCTTCAAGCCTCTGGCTTGAATAGGGATCAATTGTGGATCAAGTGTCTTTCGTCAGACCAGATACTAGATCCATCTTTGTTTGATCAGGTAGAGTTTTTCACAGACCAGCCTTGCCATGATCAGAAGCTCCTATTTGACTGTATCAATGAAGTTCTGATGGAGGTTTGTTGCCATTACTTTGGGGTCTCACCTTGGGTATCATTTGTAAAATCTTCCATAAGGCCAATACCAAATATGAAAATGGCTATCCTTAAGGTATGGGAAGTTGTTTGCTGGCATTTCCTTCCCTTGCCCCCTCCGCATACTTTGGACCAAATTGTTGGGAAAGACGTGGCAAGAAGTGTAGCATGGATGGACCTTCAATTTGATGCCGAAATAGTTGGTTTTGAAATGGGCGAAGCCATTCTAGAAGAACTGATGGAAGAGACAATATTCAGCTGCATAAGTGAAAGCTCAGAAAGTAAATGTTCTCAGCTTCCATTTGAACTGAAGGTTGAAGGACAAGGGGAATGGAAATTGATATGTAAGAATACTGGAGCATGCTTGACAGTAATCTCTTGGCAGTACCTGACTTTTTCTGATACTGAATA 2909 0.3867 MAKKSQRRPVRYDKDQSGCMWGFISMFDFRHARSTRKLIADKRRTSKHAVGSVHSKNKFEMLSNLGEDFQGNRDGGESKRPTLKSDSNKPSVKKLIEEEMFIDQDAMKDKDNAEVESKESKLGHEDPSKIDSKRKKKSRKKSRDMDTHDLNSDEMVKLELSRNQHSRQQPKDNIDLDKIMEEFCHLRSACSVMHDHDGEVHAQSNQKHVIAENKARDAIHQLVNQMIFNGNDLAEARKFLCSHELMEAFQLISSDKELFLRLLEDPNSLLLKYVQELGNAQGKNDKEYKSVIGSNLSEQGPGSLRQTREVVNHKQRNFFRKKVKSQAKNPTNGYVDSENRIVILKPGPMGLRNSESENNLASSIDSHGDVRYKGPSMRVGSHFSLTEIKKKLKHAMGKEKRGNPDKVLEELPAERKNMGQGSKFIGRDNVGMRSPNKDHFFIEKIARPIFDAKKGDKNGTFKDSEVILEHENGNPKKRVPNIYIEAKKHLCEILDGDEDMDFSSRQIPKSLGRILSLPEYNFSPLGSPERDWENNFVTAQTRFSGAEKYREANEDILSPRQEALTDRLDQATKNPEKSSVCDEISDDKVQGINSRLNFSDDFIHDEKGETSSHVVRDDIIDEGNVESTKEINVLDSSSELVGLVEGKDQNIEISEISDCARHSQCLNQDVLDKNQLPSSPVSSPSHCSITKKIVELESRADVSGRPSPVSVLDTPFLEDDISHGSTGIQPVKVPIRPLQIQFEEHDSSPMNQIKRGKHCVEENVFIFDYIQAILQASGLNRDQLWIKCLSSDQILDPSLFDQVEFFTDQPCHDQKLLFDCINEVLMEVCCHYFGVSPWVSFVKSSIRPIPNMKMAILKVWEVVCWHFLPLPPPHTLDQIVGKDVARSVAWMDLQFDAEIVGFEMGEAILEELMEETIFSCISESSESKCSQLPFELKVEGQGEQHQHVEHN 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01900 951 MobiDBLite consensus disorder prediction 40 154 - -
Bva02g01900 951 Pfam Domain of unknown function (DUF4378) 767 915 IPR025486 -
Bva02g01900 951 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
Bva02g01900 951 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 932 - -
Bva02g01900 951 MobiDBLite consensus disorder prediction 72 132 - -
Bva02g01900 951 PANTHER (, RELATED) 1 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01900 Bva-Chr2 20559519 20565236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01900 1 905 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 34.345 4.08e-116 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01900 - - gmx:100783243 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01900 02 20559519 20565236 Bva02g01900 02 20559519 20565236 ECH