Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01893 ATGGCTAGTTGGGGTCAAAAGCATGAGAAGATGCCCAAGAACCTCAAAACACAGCTAGCTGTTGCAGTGAGGAGTATTCAATGGAGCTATGGGATTTTCTGGTCATATTCAGCTGGCAAAGAAGGGACACTGGAATGGGGTGATGGCTACTACAATGGAGACATTAAGACAAGGAAGACAGTGAAAGCCATGGAATTAAAGCCTGACAAAATTGGCCTACAGAGAAGTGAGCAACTGAGAGAACTCTACAAGTTTCTTCATGAAGGAGAAACTGACCCACAAACCAAAAGGCCTTCTGCGGCATTATCCCCAGAAGATCTCACAGATTTAGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTCAAACCCAATGAAAGTTTCCCAGTAAGTGCACTAGAGAGTGGTGAAACAATGTGGCTATGTAATGCTCAATATGCAGATAGCAAAGTTTTCTCTCGTTCCTTGCTAGCAAAGAGTGCATCGATTCAGACCGTGGCGTGTTTTCCCTATCTGGGAGGTGTAATTGAGATAGGAACAACTGAACTGGTTCAAGAGGACCTCAATCTCGTTCAACATGTCAAAGCTTGCTTCTTAGACTTCTCAAAGCCTACTTGCTATGGCAAATGCTCCTCTGATCTAAACAAAGAAGATGATAATAAAGGTCCTAAATGcaccaaaattgaaaatggcaTTTCATGTACAATGGCTTTGGAGAACTTATGTTCGCCCGCAGAAGAAATCAAGTTTGATCAAGATCCAATCAAGGATCTAAAAGAAGATACTAATGAAGATTTCAACATGGATTCTCTTGATGAATGCTTCAATGACTGCGAGCACCATTGCCAGGTTGAAGACTCCATGTTTGAGGGTGTCAATGATGATGCTTCTCAAGTAAATAGCTTGCAACTGGTGGATGATAACTTGAGCAGTGGTGCTCAAGATTCCTTGGCTTCTGGCGATTGTATATCTGATGCTTTTAAGAATAAAGATGAGACATATAAGAGTTTAAGCAAAATCCAATTAGGGGAGCTTCAAGACTGCAATCACTCAAAACTAAGCTCCTTGTGCATTGGAGCTGATGAAGATTTGCACTACACCAGAACACTTTCTTCCCTTTTAGGGAATTCATCTGTATTCAAAGAATCATACACTAGTAAGTCTGGTTACAAATCCAGTTTTATAAGATGGAACATTGGAGGAATTCTTGATTTGCCGAGGCCACGGTTAAGCCAAAGCatgttaaagaatattttgttcAATGTTCCTTTGATGCATAGCAGTTTCTCCTCTCCCAAGTCACAAAAGGAAGATGAAAAAATAGGATTGCCTGGTAAATTGGGAAACAAGGACAATTGCACAGGAAATGTTCTGtctgataaaagaaaagaaaccgAAAACTTTCAGGTTCTCAAGTCCATGGTTCCTTCTGTAAATGAGGTTGACCAGATTTCGATTCTCAGCtacacaattaaatatttgaaagagCTCGAGGCACGCGTAGAAGAGTTAGAGTCTTGCATGGATAATGCAGATTCTAAAGCAAGAACTAGAAGGAAAAACCCAGATGTGTTGGAGCAGATATCAGATAACTATGACAACAGAAAGAGGAAGGCTTTTGATATTGATGAGCCAGAGACAGAACCAAATAGAGTTGCTCCCAAGGAAGGGATACCATTGGATGTGAAAGTGAACATGAAGGAGCAAGAGGTTCTGATTGAGATGAAATGCCCTTACAGGGAATACATATTGCTTGATATCATGGATGCTATAAACAATCTGCATTTAGATGCTCACACAGTTCAATCATCGACAGAGGATGGTGTTCTCATATTGACCCTTAAGTCTAAGTTTCGAGGAGCAGCCATTGCGCCACTGGGAATGATCAAAGAAGCACTCTGGAAAGTTTCCGGCAAGATTTG 1922 0.3959 MASWGQKHEKMPKNLKTQLAVAVRSIQWSYGIFWSYSAGKEGTLEWGDGYYNGDIKTRKTVKAMELKPDKIGLQRSEQLRELYKFLHEGETDPQTKRPSAALSPEDLTDLEWYYLVCMSFVFKPNESFPVSALESGETMWLCNAQYADSKVFSRSLLAKSASIQTVACFPYLGGVIEIGTTELVQEDLNLVQHVKACFLDFSKPTCYGKCSSDLNKEDDNKGPKCTKIENGISCTMALENLCSPAEEIKFDQDPIKDLKEDTNEDFNMDSLDECFNDCEHHCQVEDSMFEGVNDDASQVNSLQLVDDNLSSGAQDSLASGDCISDAFKNKDETYKSLSKIQLGELQDCNHSKLSSLCIGADEDLHYTRTLSSLLGNSSVFKESYTSKSGYKSSFIRWNIGGILDLPRPRLSQSMLKNILFNVPLMHSSFSSPKSQKEDEKIGLPGKLGNKDNCTGNVLSDKRKETENFQVLKSMVPSVNEVDQISILSYTIKYLKELEARVEELESCMDNADSKARTRRKNPDVLEQISDNYDNRKRKAFDIDEPETEPNRVAPKEGIPLDVKVNMKEQEVLIEMKCPYREYILLDIMDAINNLHLDAHTVQSSTEDGVLILTLKSKFRGAAIAPLGMIKEALWKVSGKI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01893 640 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 198 IPR025610 -
Bva02g01893 640 PANTHER TRANSCRIPTION FACTOR TT8 1 639 - -
Bva02g01893 640 Gene3D - 461 528 IPR036638 GO:0046983
Bva02g01893 640 Coils Coil 494 514 - -
Bva02g01893 640 PANTHER TRANSCRIPTION FACTOR MYC1 1 639 - -
Bva02g01893 640 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 466 509 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01893 Bva-Chr2 20520063 20524100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01893 7 637 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 42.360 1.09e-150 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01893 - - adu:107472380 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01893 02 20520063 20524100 Bva02g01893 02 20520063 20524100 ECH