Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01883 ATGGGGATTCAGTGCTCCAGACTTGTGCCATGCTGCTGGAATTCGCAAGTTAAGGCATCAGTTCTTGAAGTTCCAGATATTGaaaatgaagatataaATGAAGCCAATAACTGGCCTTCATTTCGTGAATTTACTCTCGAGCAACTGAAGAATGCAACATCTGGTTTTGCCGTTGAGAATATCGTATCTGAACATGGAGAGAAGGCTCCGAATGTTGTTTATAAAGGGAAGCTGGAGAATCAGACAAGGATTGTTGTCAAGCGCTTCAACAGAAATGCTTGGCCTGATGCTCGGCAATTTTTGGAGGAAGCAAAATCAGTTGGTCAGCTCCGTAACCATAGATTGGCAAATTTGCTTGGTTGTTGTTGCGAAGGCGATGAAAGGTTGCTCGTTGCAGAGTATATGCCAAATGAAACACTTGCAAAACACCTTTTCCATTGGGAAACACAACCTATGAAATGGGCAATGCGACTAAGAGTTGTTCTACATCTTGCACAGGCTCTAGAATACTGTACAAGCAGAGGCCGTGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGATGGCAATCCAAGGCTTTCAAGTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTACAGCACAAACTTGGCATTTACACCTCCAGAATATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGCACTCTTTTGCTTGATCTTCTCAGTGGGAAGCATATTCCCCCCAGCCACGCCCTTGATTTGATTCGAGACAGAAATCTTCAGATGCTGACAGATTCCTGTTTGGAAGGACAATTTTCTGATGATGATGGAACTGAGCTGGTACGCCTGGCATCTAGATGTTTACAGTATGAACCCAGAGAGCGGCCAAATCCCAAGTCATTAGTTGCTGCTTTGGCTCCTCTTCAGAAAGAAACAGAGGTTCCCTCGCATGTCTTGATGGGTATCCCACATGGTGCTACTTTTACTTCATTGTCCCCACTTGGTGAAGCATGCTTAAGAAAGGACTTGACTGCCATACATGAAGTTCTGGAAAGTATTGGCTATAAAGACGATGAAGGAGTGACAAATGAGTTATCGTTTCAAATGTGGACTGATCAAATGCAGGATACATTAAATTGTAAGAAGAAGGGTGATGTTGCCTTTCGGCAGAAGGACTTTAAACTTGCCATTGACTACTACACACAGTTCATCGATGCCGGAACAATGGTTTCTCCAACAGTCTTTGCACGGCGTAGTTTGTGTTATCTAATCAGCGACATGGCTCGGGAAGCCATGGACGATGCAATGCAAGCTCAAGTCATTTCCCCTGTATGGCACATTGCATCTTACCTTCAATCTGTTGCCCTTTCTGGACTTGGGATGGAGAATGAAGCACAAGTAGCTCTTAAAGAAGGTGCAGCACTGGACACCAAGCGGAATTCAACTGCCGGAAATAAGTG 1475 0.4353 MGIQCSRLVPCCWNSQVKASVLEVPDIENEDINEANNWPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIVVKRFNRNAWPDARQFLEEAKSVGQLRNHRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSRGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGIPHGATFTSLSPLGEACLRKDLTAIHEVLESIGYKDDEGVTNELSFQMWTDQMQDTLNCKKKGDVAFRQKDFKLAIDYYTQFIDAGTMVSPTVFARRSLCYLISDMAREAMDDAMQAQVISPVWHIASYLQSVALSGLGMENEAQVALKEGAALDTKRNSTAGNK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01883 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01883 491 PANTHER LRR RECEPTOR-LIKE KINASE 1 488 - -
Bva02g01883 491 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Bva02g01883 491 Gene3D Tetratricopeptide repeat domain 380 490 IPR011990 GO:0005515
Bva02g01883 491 SUPERFAMILY TPR-like 381 482 IPR011990 GO:0005515
Bva02g01883 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Bva02g01883 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Bva02g01883 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 488 IPR045845 GO:0004672|GO:0009742
Bva02g01883 491 SUPERFAMILY Protein kinase-like (PK-like) 38 319 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01883 Bva-Chr2 20471207 20475997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01883 29 313 Glycoside Hydrolase AT3G07070 33.227 3.61e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva02g01883 PK_Tyr_Ser-Thr 2.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01883 K14500 - gmx:100781311 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01883 02 20471207 20475997 Bva02g01883 02 20471207 20475997 ECH