Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01868 ATGGGAAGGACACCCTGTTGTGACAAGAGGGGTTTGAAGAAAGGGCCATGGACAGCTGAAGAGGATGAgattcttgttaattttatcaagaaGAATGGTGGCCATGGAAGCTGGCGTTCTCTCCCTAAGTTGGCAGGTCTTCTTCGGTGTGGGAAGAGTTGTCGGCTTAGGTGGACCAACTATCTGAGACCTGATATTAAACGTGGTCCTTTTACTAGTGAGGAAGAAAAGCTTGTCATACAACTTCATGCCATTCTTGGGAATAGGTGGGCTGGTATTGCTGCTCAACTACCAGGAAGAACAGACAACGAGATAAAGAACTTATGGAATACCCACTTGAAGAAGCGCCTCATATGCATGGGACTTGACCCACAAACCCATGAGCTAGTGACCTCTCATTGCCCAATTGACAAGGCACAGGCCTCCGTTTCCACTCGTCACATGGCACAGTGGGAGAGTGCAAGGCTTGAAGCAGAGGCAAGGCTCTCTAGAGAGTCATCTCTATTCAGTCCCTCAAATGCCAAAGCTGATTCTGACTATTTCCTCCGCGTTTGGAACTCTGAAGTTGGAGAATCATTTCGCAAAATTCACAAGGCTGCTAAAGCTGCATGCCATAGCCCCATTTCTCCAGGTTCTGCTATAACTACAGAAGTGGCAGCGAACCCAGTAGGGACTTCAACCCCAGCTAGCAATTTGAATGAAGAGTTTGAGTGGAGAAGCAGCAGCAAGGCAGATGCTGAAGATGTTAAGAATGGATGCGACTCATCAAGTTCTAATGACTTGGAAGATTCTTCTGATACTGCATTGCAGCTGTGGTTAGATTTTCCCATAAACAATGATATGAGCTTCTTGGAGGGGAACTCTTATATTTGCCCCCTTTA 881 0.4574 MGRTPCCDKRGLKKGPWTAEEDEILVNFIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTSEEEKLVIQLHAILGNRWAGIAAQLPGRTDNEIKNLWNTHLKKRLICMGLDPQTHELVTSHCPIDKAQASVSTRHMAQWESARLEAEARLSRESSLFSPSNAKADSDYFLRVWNSEVGESFRKIHKAAKAACHSPISPGSAITTEVAANPVGTSTPASNLNEEFEWRSSSKADAEDVKNGCDSSSSNDLEDSSDTALQLWLDFPINNDMSFLEGNSYICPL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01868 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bva02g01868 293 MobiDBLite consensus disorder prediction 240 263 - -
Bva02g01868 293 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bva02g01868 293 SMART sant 13 64 IPR001005 -
Bva02g01868 293 SMART sant 67 115 IPR001005 -
Bva02g01868 293 PANTHER PROTEIN ODORANT1-LIKE 1 287 - -
Bva02g01868 293 CDD SANT 16 62 IPR001005 -
Bva02g01868 293 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bva02g01868 293 Gene3D - 11 68 - -
Bva02g01868 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bva02g01868 293 CDD SANT 70 113 IPR001005 -
Bva02g01868 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 287 - -
Bva02g01868 293 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bva02g01868 293 Gene3D - 70 117 - -
Bva02g01868 293 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bva02g01868 293 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01868 Bva-Chr2 20401552 20403481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01868 1 287 MYB Transcription Factor Family AT3G61250 65.306 4.08e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g01868 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01868 K09422 - rcu:8261851 429.869